Ova1-OVRM10075G01
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTCCCGGCCAGGAAACGCCGTGGCGCCGCGCTGGGCCTAACTCGAGTCCTGCTGCCTAC CGGGAGTGCCGTGCGCCGCAGCCCGGGCCCAGGCCTGGGACAAGGTCTTCAGAGCTACTG GCAGATAATTTTGGGGGACTTCATATTCAGAGGTCTATAAAAAGGATTCCCCATGTCCGT AACATGTTGGTTAAGGCTCTGCAGCTCACCCCCACTCTCAGAGTGGCCAGTCTCCAATAA TTGGACCCCGTGATTTCCACTCTCTGCTGTGTTGGACGTCATGAGCATTGCAATCCCTCT GGGAGTCACCACACCAGATACATCCTACTCAGATATGGCTGCTGGATCAGACCCTGAATC TGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGGAC CACTCAGAGGCATGGGTGTCGAGGACTGCCTTATGCTACGATCATCCCTCGTTCTGACCT GAATGGCCTGCCGTCGCCCGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGA GACTGTTCCTACCTGGTGTCCTTGTGGTCTTTCTCAGGATGGCTTCCTTCTCAACTGTGA CAAGTGCAGGTAAGATCGTGTTCTATCTAAATCCAAGCCTGGGTTACTGGGATTAGGGTT TCTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTCCCGGCCAGGAAACGCCGTGGCGCCGCGCTGGGCCTAACTCGAGTCCTGCTGCCTAC CGGGAGTGCCGTGCGCCGCAGCCCGGGCCCAGGCCTGGGACAAGGTCTTCAGAGCTACTG GCAGATAATTTTGGGGGACTTCATATTCAGAGGTCTATAAAAAGGATTCCCCATGTCCGT AACATGTTGGTTAAGGCTCTGCAGCTCACCCCCACTCTCAGAGTGGCCAGTCTCCAATAA TTGGACCCCGTGATTTCCACTCTCTGCTGTGTTGGACGTCATGAGCATTGCAATCCCTCT GGGAGTCACCACACCAGATACATCCTACTCAGATATGGCTGCTGGATCAGACCCTGAATC TGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTCATAATTATGGGAC CACTCAGAGGCATGGGTGTCGAGGACTGCCTTATGCTACGATCATCCCTCGTTCTGACCT GAATGGCCTGCCGTCGCCCGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGA GACTGTTCCTACCTGGTGTCCTTGTGGTCTTTCTCAGGATGGCTTCCTTCTCAACTGTGA CAAGTGCAGGTAAGATCGTGTTCTATCTAAATCCAAGCCTGGGTTACTGGGATTAGGGTT TCTT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 202-321, - strand, RNAz p=0.763836 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 202-321, - strand, RNAz p=0.763836 |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 163-351, gnl|bosTau2|chr22 (14582547-14582359) | |
| 163-351, gnl|Hg17|chr3 (9445505-9445693) | |
| 163-351, gnl|Mm7|chr6 (113265861-113266049) | |
| 352-457, gnl|bosTau2|chr22 (14577669-14577564) | |
| 352-457, gnl|canFam2|chr20 (11726051-11725936) | |
| 352-457, gnl|danRer3|chrUn (18942059-18941938) | |
| 352-457, gnl|dasNov1|scaffold_36002 (4433-4318) | |
| 352-457, gnl|echTel1|scaffold_310129 (46516-46631) | |
| 352-457, gnl|fr1|chrUn (215301073-215300986) | |
| 352-457, gnl|galGal2|chr12 (11399198-11399310) | |
| 352-457, gnl|hg17|chr3 (9450488-9450603) | |
| 352-457, gnl|Hg17|chr3 (9450529-9450634) | |
| 352-457, gnl|loxAfr1|scaffold_5529 (11188-11303) | |
| 352-457, gnl|mm7|chr6 (113270772-113270887) | |
| 352-457, gnl|Mm7|chr6 (113270813-113270918) | |
| 352-457, gnl|monDom2|scaffold_5 (36294415-36294531) | |
| 352-457, gnl|oryCun1|scaffold_206156 (39162-39277) | |
| 352-457, gnl|panTro1|chr2 (9824227-9824342) | |
| 352-457, gnl|rheMac2|chr2 (51558339-51558224) | |
| 352-457, gnl|rn3|chr4 (149231432-149231547) | |
| 352-457, gnl|tetNig1|chr19 (1276885-1276798) | |
| 352-457, gnl|xenTro1|scaffold_386 (773167-773268) | |
| 458-664, gnl|bosTau2|chr22 (14577180-14576974) | |
| 458-664, gnl|canFam2|chr20 (11725586-11725362) | |
| 458-664, gnl|danRer3|chrUn (18941385-18941118) | |
| 458-664, gnl|dasNov1|scaffold_36002 (3967-3743) | |
| 458-664, gnl|echTel1|scaffold_310129 (46980-47204) | |
| 458-664, gnl|fr1|chrUn (215300617-215300369) | |
| 458-664, gnl|galGal2|chr12 (11400167-11400394) | |
| 458-664, gnl|hg17|chr3 (9450953-9451177) | |
| 458-664, gnl|Hg17|chr3 (9451018-9451224) | |
| 458-664, gnl|loxAfr1|scaffold_5529 (11653-11877) | |
| 458-664, gnl|mm7|chr6 (113271237-113271461) | |
| 458-664, gnl|Mm7|chr6 (113271302-113271508) | |
| 458-664, gnl|monDom2|scaffold_5 (36294867-36295091) | |
| 458-664, gnl|oryCun1|scaffold_206156 (39627-39851) | |
| 458-664, gnl|panTro1|chr2 (9824692-9824916) | |
| 458-664, gnl|rheMac2|chr2 (51557874-51557650) | |
| 458-664, gnl|rn3|chr4 (149231897-149232121) | |
| 458-664, gnl|tetNig1|chrUn_random (4975088-4974840) | |
| 458-664, gnl|xenTro1|scaffold_386 (773589-773837) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 163-351, gnl|bosTau2|chr22 (14582547-14582359) | |
| 163-351, gnl|Hg17|chr3 (9445505-9445693) | |
| 163-351, gnl|Mm7|chr6 (113265861-113266049) | |
| 352-457, gnl|bosTau2|chr22 (14577669-14577564) | |
| 352-457, gnl|canFam2|chr20 (11726051-11725936) | |
| 352-457, gnl|danRer3|chrUn (18942059-18941938) | |
| 352-457, gnl|dasNov1|scaffold_36002 (4433-4318) | |
| 352-457, gnl|echTel1|scaffold_310129 (46516-46631) | |
| 352-457, gnl|fr1|chrUn (215301073-215300986) | |
| 352-457, gnl|galGal2|chr12 (11399198-11399310) | |
| 352-457, gnl|hg17|chr3 (9450488-9450603) | |
| 352-457, gnl|Hg17|chr3 (9450529-9450634) | |
| 352-457, gnl|loxAfr1|scaffold_5529 (11188-11303) | |
| 352-457, gnl|mm7|chr6 (113270772-113270887) | |
| 352-457, gnl|Mm7|chr6 (113270813-113270918) | |
| 352-457, gnl|monDom2|scaffold_5 (36294415-36294531) | |
| 352-457, gnl|oryCun1|scaffold_206156 (39162-39277) | |
| 352-457, gnl|panTro1|chr2 (9824227-9824342) | |
| 352-457, gnl|rheMac2|chr2 (51558339-51558224) | |
| 352-457, gnl|rn3|chr4 (149231432-149231547) | |
| 352-457, gnl|tetNig1|chr19 (1276885-1276798) | |
| 352-457, gnl|xenTro1|scaffold_386 (773167-773268) | |
| 458-664, gnl|bosTau2|chr22 (14577180-14576974) | |
| 458-664, gnl|canFam2|chr20 (11725586-11725362) | |
| 458-664, gnl|danRer3|chrUn (18941385-18941118) | |
| 458-664, gnl|dasNov1|scaffold_36002 (3967-3743) | |
| 458-664, gnl|echTel1|scaffold_310129 (46980-47204) | |
| 458-664, gnl|fr1|chrUn (215300617-215300369) | |
| 458-664, gnl|galGal2|chr12 (11400167-11400394) | |
| 458-664, gnl|hg17|chr3 (9450953-9451177) | |
| 458-664, gnl|Hg17|chr3 (9451018-9451224) | |
| 458-664, gnl|loxAfr1|scaffold_5529 (11653-11877) | |
| 458-664, gnl|mm7|chr6 (113271237-113271461) | |
| 458-664, gnl|Mm7|chr6 (113271302-113271508) | |
| 458-664, gnl|monDom2|scaffold_5 (36294867-36295091) | |
| 458-664, gnl|oryCun1|scaffold_206156 (39627-39851) | |
| 458-664, gnl|panTro1|chr2 (9824692-9824916) | |
| 458-664, gnl|rheMac2|chr2 (51557874-51557650) | |
| 458-664, gnl|rn3|chr4 (149231897-149232121) | |
| 458-664, gnl|tetNig1|chrUn_random (4975088-4974840) | |
| 458-664, gnl|xenTro1|scaffold_386 (773589-773837) |