Non-Coding RNA Search

Ova1-OVRM10077F08

Sequence:


               
               GATACATCATGGTATAGTTTACATAGAAAAAACAACCAGAACTCCATTTAGCAGACCATT
TTCAAAGAAATGACCTTTGCCTCACACCAAAAATTGGTGAATAGATGAACATAGGATATA
AATTAATGTAAAATGTTTGCAAGTACTAGGATAAATTTTTATGATTCTTTGCTTTAGTCT
ACTTTTTAAACTTACTGTCCTCTGCTGAAGCAAGTCCTTAAGAGATGAGAGCTTTGACTG
TGTTCTATTAATTGAATAACCAGGGCTAATAGGAATCCAGCATGTTACTGGAAGAGCTGG
TCAGCCACTGTCTATTCTGAAATATGTTATCTCGTTTCATCTTTACCATAACTCTATGAA
GTAAGCACCCATTTTAGAGATGGATGGGCCTCGGATTTGGAGACGATACAGCTAATTAAA
TGATACCACCAAAATTTAAATCCAGGTGGGCTGCAGATTGTTTTGCTGGTGGCATAGTCT
AAATATCAGTGAATAGAAATATGCATATTGATCTAGAATACCTTTCACTGTTGAGTAGGA
AGAAAACGAGTCATTTGGTATCTATGGCAAGGCCTTCTGATTCTCACCATGGGCCTCCCT
GTACCCCAGTGTTTTCATGAATAAGGTTCACAGTGGATAACATACAACCCATCTGTTTGT
GAATCATACATAAAGGGAGTATAGTGAGTTTCTGGTGTATTTCACTCTGAGTGAGAAATC
AAGCAAAAGCGAATATATCAGTTTTCTAGGGCTACCATAACAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATACATCATGGTATAGTTTACATAGAAAAAACAACCAGAACTCCATTTAGCAGACCATT
TTCAAAGAAATGACCTTTGCCTCACACCAAAAATTGGTGAATAGATGAACATAGGATATA
AATTAATGTAAAATGTTTGCAAGTACTAGGATAAATTTTTATGATTCTTTGCTTTAGTCT
ACTTTTTAAACTTACTGTCCTCTGCTGAAGCAAGTCCTTAAGAGATGAGAGCTTTGACTG
TGTTCTATTAATTGAATAACCAGGGCTAATAGGAATCCAGCATGTTACTGGAAGAGCTGG
TCAGCCACTGTCTATTCTGAAATATGTTATCTCGTTTCATCTTTACCATAACTCTATGAA
GTAAGCACCCATTTTAGAGATGGATGGGCCTCGGATTTGGAGACGATACAGCTAATTAAA
TGATACCACCAAAATTTAAATCCAGGTGGGCTGCAGATTGTTTTGCTGGTGGCATAGTCT
AAATATCAGTGAATAGAAATATGCATATTGATCTAGAATACCTTTCACTGTTGAGTAGGA
AGAAAACGAGTCATTTGGTATCTATGGCAAGGCCTTCTGATTCTCACCATGGGCCTCCCT
GTACCCCAGTGTTTTCATGAATAAGGTTCACAGTGGATAACATACAACCCATCTGTTTGT
GAATCATACATAAAGGGAGTATAGTGAGTTTCTGGTGTATTTCACTCTGAGTGAGAAATC
AAGCAAAAGCGAATATATCAGTTTTCTAGGGCTACCATAACAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               224-328, + strand, RNAz p=0.994751

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               224-328, + strand, RNAz p=0.994751

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               6-613, gnl|bosTau2|chr23 (29962083-29962685)
               

               
               6-613, gnl|Hg17|chr6 (18051411-18050535)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-613, gnl|bosTau2|chr23 (29962083-29962685)
               

               
               6-613, gnl|Hg17|chr6 (18051411-18050535)

	6-613, gnl\|bosTau2\|chr23 (29962083-29962685)
	6-613, gnl\|Hg17\|chr6 (18051411-18050535)