Non-Coding RNA Search

Ova1-OVRM10078C07

Sequence:


               
               CTTGCTGGTGTCGGCTCGGAGAGGTGAGTTGCTCGCGTGCATTGAGGAAATGGGCGCGGG
GGCGGCGCGGGGGCGGCGCGGCCCTGTGTGTGCAGGGCTGCAGTGACTGTGTAGTTTGTG
ACGCTGAGTGGACATTGGGTTCCCCGATGCATCCTCTGTCCGCCCGCTTCGGGGCCGCAC
AGATGCAGCGGCCCAGAATGGCTCCGAGTTAGATTTATGAACCCCACAGTGAAGGCCCCT
AACAAAAAGACGCAGTCTGAAGAACAACAGCTTTCAAAGCCACAGCTTAACCAGAGCTCC
CTCCCAAGGCAGCTCTAGAGAACTCGTAGACAGATACCAGCCCAGGTCCTTGTACTCTGG
CCGTTCTCTCTGATACCGGGAAGGGTCAGCTTCACCCCAGGCTCCCTGTTATTTCCATCG
GGTTTGGTGTGTGGTGGATGGTGGGAGAAAGTGTGGTAGTGAAACCGGACACGGTCCTGT
GGGGCTCCTGGGCGCAAGAGTAGCGGGGGTGTGTCTTTAGCCTGGCCTGGCTTACCTCCA
AAAAAAGGCTCAGTGCGTTGAGATTCCTGTTTCCTTACCCCAGCCTGCTGATCTTTAGGA
CGGAGAGAGGAAGGAGGAAATAATTGCATATATNTATATTTGTGTATGTATATGCACATA
TGTATATATATATGAGTTTGTTTTTTCCCTTTGTTCCATGAAATGTAATTTTTATTTTTT
CTGGACATGGTGGTATTTGCTTCTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTGCTGGTGTCGGCTCGGAGAGGTGAGTTGCTCGCGTGCATTGAGGAAATGGGCGCGGG
GGCGGCGCGGGGGCGGCGCGGCCCTGTGTGTGCAGGGCTGCAGTGACTGTGTAGTTTGTG
ACGCTGAGTGGACATTGGGTTCCCCGATGCATCCTCTGTCCGCCCGCTTCGGGGCCGCAC
AGATGCAGCGGCCCAGAATGGCTCCGAGTTAGATTTATGAACCCCACAGTGAAGGCCCCT
AACAAAAAGACGCAGTCTGAAGAACAACAGCTTTCAAAGCCACAGCTTAACCAGAGCTCC
CTCCCAAGGCAGCTCTAGAGAACTCGTAGACAGATACCAGCCCAGGTCCTTGTACTCTGG
CCGTTCTCTCTGATACCGGGAAGGGTCAGCTTCACCCCAGGCTCCCTGTTATTTCCATCG
GGTTTGGTGTGTGGTGGATGGTGGGAGAAAGTGTGGTAGTGAAACCGGACACGGTCCTGT
GGGGCTCCTGGGCGCAAGAGTAGCGGGGGTGTGTCTTTAGCCTGGCCTGGCTTACCTCCA
AAAAAAGGCTCAGTGCGTTGAGATTCCTGTTTCCTTACCCCAGCCTGCTGATCTTTAGGA
CGGAGAGAGGAAGGAGGAAATAATTGCATATATNTATATTTGTGTATGTATATGCACATA
TGTATATATATATGAGTTTGTTTTTTCCCTTTGTTCCATGAAATGTAATTTTTATTTTTT
CTGGACATGGTGGTATTTGCTTCTCCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               41-273, + strand, RNAz p=0.662303

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               41-273, + strand, RNAz p=0.662303

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-459, gnl|bosTau2|chr18 (43004828-43004377)
               

               
               1-459, gnl|Hg17|chr19 (41561927-41561468)
               

               
               1-459, gnl|Mm7|chr7 (26994109-26993715)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-459, gnl|bosTau2|chr18 (43004828-43004377)
               

               
               1-459, gnl|Hg17|chr19 (41561927-41561468)
               

               
               1-459, gnl|Mm7|chr7 (26994109-26993715)

	1-459, gnl\|bosTau2\|chr18 (43004828-43004377)
	1-459, gnl\|Hg17\|chr19 (41561927-41561468)
	1-459, gnl\|Mm7\|chr7 (26994109-26993715)