Non-Coding RNA Search

Ova1-OVRM10080C07

Sequence:


               
               AAACAAAACAAAACAAAACCAGACTGAGGCGAGTATTAGAATTTAGCACTGGTCAATAAA
AGAGCAAAGGACATTGGCCAATCCAACACCCTCCAGGCATTCCCTAAAACCCACACCAGA
GCAGTCTTCTGTCCTCCCCTTGTGAGGATATGGTTAAGAGCACAGACTCTGGGGCCAGAC
TGAGTTGAAATCCTGGTTCTGTTACTTACTCACTGTGTGACCTTGAACTAGCCAGTTGGT
TTCTCTGTGCCATAATTTTATCATGGATAGAATTGAAATACTAACAGTGAGAGCTGCATG
CTAGAGCTGCGGTGAAGATCAAATGAAATGAGTATATTTAAAATATTTAAAACAGTGGTC
AATGAATATTATGATCATTGTTGTCCATAGGCGTGGTGATAGAGTAGAAAGAGCACAGGA
CCTGAAGCCCAAAGTATGGACTTGAGTCTGCTGCTTACAAGCTGTATGACCTTTGCTGAG
TTACAGGTATTCTCTGAGTCTCCAGTTCCTCGATGAAAAATGGGGATAATAATTCCTGTC
CCACCTACTAGAAAGAGTGATGTGCTGGTAAAGAGAGGTGGTTTTAAGGTACCGTCTTAG
CCTAGGAGGTAAGGTGACTGACTGTCTGAGGGTCCAATTCAAAACCAGCACACATCTGAT
CAAAGCAGAAGTAGACAGAGTTGCCTTAAAGTAACAGAAGCCCCCTCCCNAACCAGAAGC
AAGCTGAAGTGACACTTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAACAAAACAAAACAAAACCAGACTGAGGCGAGTATTAGAATTTAGCACTGGTCAATAAA
AGAGCAAAGGACATTGGCCAATCCAACACCCTCCAGGCATTCCCTAAAACCCACACCAGA
GCAGTCTTCTGTCCTCCCCTTGTGAGGATATGGTTAAGAGCACAGACTCTGGGGCCAGAC
TGAGTTGAAATCCTGGTTCTGTTACTTACTCACTGTGTGACCTTGAACTAGCCAGTTGGT
TTCTCTGTGCCATAATTTTATCATGGATAGAATTGAAATACTAACAGTGAGAGCTGCATG
CTAGAGCTGCGGTGAAGATCAAATGAAATGAGTATATTTAAAATATTTAAAACAGTGGTC
AATGAATATTATGATCATTGTTGTCCATAGGCGTGGTGATAGAGTAGAAAGAGCACAGGA
CCTGAAGCCCAAAGTATGGACTTGAGTCTGCTGCTTACAAGCTGTATGACCTTTGCTGAG
TTACAGGTATTCTCTGAGTCTCCAGTTCCTCGATGAAAAATGGGGATAATAATTCCTGTC
CCACCTACTAGAAAGAGTGATGTGCTGGTAAAGAGAGGTGGTTTTAAGGTACCGTCTTAG
CCTAGGAGGTAAGGTGACTGACTGTCTGAGGGTCCAATTCAAAACCAGCACACATCTGAT
CAAAGCAGAAGTAGACAGAGTTGCCTTAAAGTAACAGAAGCCCCCTCCCNAACCAGAAGC
AAGCTGAAGTGACACTTTA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               472-587, - strand, RNAz p=0.715138

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               472-587, - strand, RNAz p=0.715138

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               16-606, gnl|bosTau2|chr3 (59738940-59738357)
               

               
               16-606, gnl|Mm7|chr4 (103719345-103719880)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-606, gnl|bosTau2|chr3 (59738940-59738357)
               

               
               16-606, gnl|Mm7|chr4 (103719345-103719880)

	16-606, gnl\|bosTau2\|chr3 (59738940-59738357)
	16-606, gnl\|Mm7\|chr4 (103719345-103719880)