Non-Coding RNA Search

Ova1-OVRM10080E04

Sequence:


               
               AGCGGCGGCGGCGGCGGCTGGGGCAGCTGCAGCCCCGGCGCCGTGGCAAAGACTCGGCAG
GCTGAGGAGCGGCGGCGGCGGCGGCACGGGGTGCGCGGGGCGCGGCGGCCGGAGCCCGGG
GCCCGCTATGGGCCTCCCGGAGTCGGGCGCGCTCCGGCCGCTGGCGCTGCTGTTGCTGCT
GTTGCTGCGGCTCCACCATCTCTCCGCGGCGACGGATCCATTGCGCAGCGGCCAAGGGCC
TGCCAAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCGGCGGCGGCGGCGGCTGGGGCAGCTGCAGCCCCGGCGCCGTGGCAAAGACTCGGCAG
GCTGAGGAGCGGCGGCGGCGGCGGCACGGGGTGCGCGGGGCGCGGCGGCCGGAGCCCGGG
GCCCGCTATGGGCCTCCCGGAGTCGGGCGCGCTCCGGCCGCTGGCGCTGCTGTTGCTGCT
GTTGCTGCGGCTCCACCATCTCTCCGCGGCGACGGATCCATTGCGCAGCGGCCAAGGGCC
TGCCAAGGA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               141-243, - strand, RNAz p=0.999989

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               141-243, - strand, RNAz p=0.999989

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               146-235, + strand, RNAmicro p=0.950869

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               146-235, + strand, RNAmicro p=0.950869

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-243, gnl|bosTau2|chr12 (48298830-48299067)
               

               
               1-243, gnl|Hg17|chr1 (53505732-53505474)
               

               
               1-243, gnl|Mm7|chr4 (107178731-107178965)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-243, gnl|bosTau2|chr12 (48298830-48299067)
               

               
               1-243, gnl|Hg17|chr1 (53505732-53505474)
               

               
               1-243, gnl|Mm7|chr4 (107178731-107178965)

	1-243, gnl\|bosTau2\|chr12 (48298830-48299067)
	1-243, gnl\|Hg17\|chr1 (53505732-53505474)
	1-243, gnl\|Mm7\|chr4 (107178731-107178965)