Non-Coding RNA Search

Ova1-OVRM10081B04

Sequence:


               
               ATCAGTTATGGTACTGTCACCCACCAACAGTGGATGTGTTATTTGCAGAATTATTCTCAG
GAACTGGAATTTGCACATGAAATGAAACCTGTATGCTAGTCATGATAATATGATATTGTG
TCTATTGATGTGTCTCAGATTTTACTCAAATTAACTTAAAAAAAGATTGCCTTATCTTAG
TACAAGCTTAATATTTGCAGAGATCCTTAGGTTCACTTGAAGAAATAGGTTCTATAAATA
CCTTTACAACCTATACTGATTTTATCTATAAATGAGTTTGTGTGTGTATCTGAATTTGTC
TCTTGCGTCTGAATAAGGGCCAACCTGCTAGGTTCTACTAGTAGAAGTATGTAATTAAGG
TAAAAGGATTTGAACAGGCCAGCCAGTCCTAAAATTAGCTCTTGCTTTGATGTTCCCCAG
GTGCAAATGCAAACATCCCTGTTCCTTTCAGCCTTGATGCACTTCATTTCTTTTTTAAGG
CTTGTGCATGCCTTATTACCAGGATTGCAGCAAGTTTGGTTCTGGTTCCGATTGGGGCAC
TGAGATTGTTTTCTCCTGTTGTTCATCAGTCATATTTGAAATGTCAATTGGAACCTTAGA
AGCTTGTTTAAATATTCTCTTAAGGATAAGCATTGTCTTGCTTATGTTTAGCTCGTGATA
GTCCAAAGTCTTTTGAGCTTTTTGGGGGGCTTATATTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCAGTTATGGTACTGTCACCCACCAACAGTGGATGTGTTATTTGCAGAATTATTCTCAG
GAACTGGAATTTGCACATGAAATGAAACCTGTATGCTAGTCATGATAATATGATATTGTG
TCTATTGATGTGTCTCAGATTTTACTCAAATTAACTTAAAAAAAGATTGCCTTATCTTAG
TACAAGCTTAATATTTGCAGAGATCCTTAGGTTCACTTGAAGAAATAGGTTCTATAAATA
CCTTTACAACCTATACTGATTTTATCTATAAATGAGTTTGTGTGTGTATCTGAATTTGTC
TCTTGCGTCTGAATAAGGGCCAACCTGCTAGGTTCTACTAGTAGAAGTATGTAATTAAGG
TAAAAGGATTTGAACAGGCCAGCCAGTCCTAAAATTAGCTCTTGCTTTGATGTTCCCCAG
GTGCAAATGCAAACATCCCTGTTCCTTTCAGCCTTGATGCACTTCATTTCTTTTTTAAGG
CTTGTGCATGCCTTATTACCAGGATTGCAGCAAGTTTGGTTCTGGTTCCGATTGGGGCAC
TGAGATTGTTTTCTCCTGTTGTTCATCAGTCATATTTGAAATGTCAATTGGAACCTTAGA
AGCTTGTTTAAATATTCTCTTAAGGATAAGCATTGTCTTGCTTATGTTTAGCTCGTGATA
GTCCAAAGTCTTTTGAGCTTTTTGGGGGGCTTATATTTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               343-462, + strand, RNAz p=0.545354

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               343-462, + strand, RNAz p=0.545354

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-665, gnl|bosTau2|chr22 (26974194-26973540)
               

               
               1-665, gnl|Hg17|chr3 (65946837-65947478)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-665, gnl|bosTau2|chr22 (26974194-26973540)
               

               
               1-665, gnl|Hg17|chr3 (65946837-65947478)

	1-665, gnl\|bosTau2\|chr22 (26974194-26973540)
	1-665, gnl\|Hg17\|chr3 (65946837-65947478)