Ova1-OVRM10084H05
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTGGCAAGGCCTTGACATTTGCAGAAACTTCAGAACCCGTTGTATATTCTTTGCTGAC CCTTTTAGAGGAAGAATCAGAAATAGCCAAATTGCTAACAAATACCCATCATAAGTACAG CGTCCCTCCTGTGAACTTCCTGCCAGTGTCCTCTGGGACCAGAATAAATAATCCTGTCTG CCGTAAACCAGTGATTCCAAGTAATTCTTTTGTTTCAAGTCAAATTCCAGAAGTTGAAAA AGAATCAGAACCTGAGGAGGAGACAGATGAGGATGAAGGTCCTGCACCAGTTATGGTGGA GAATGAAAGCTATGTCAACCTTAAGAAAAAGATTTCCAAAAGATATGACTGGCAGGCAAA ATCAGTACATGCCGAAAATGCTAAAATCTGCAAGCAGTTCCGAATAAAACAGGCTTCCAG ACAGTTCCAGTCAATTCTGCAGGAAAGACAATCACTCCCTGCTTGGGAAGAAAGAGAAAA CATTCTTAAATTGTTGAGCAAGCACCAAGTGCTTGTTGTAAGTGGTATGACTGGATGTGG GAAAACCTCACAGATTCCACAGTTTATTCTGGATGATTCTCTGAATGGGCCACCTGAGAA GGTGGCTAACATCGTCTGTACCCAACCCCGACGAATCTCTGGCATCTCTGTTGCCGAACG TGTGGCTAAAGAAAGAGCAGAAAGAGTGGGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTGGCAAGGCCTTGACATTTGCAGAAACTTCAGAACCCGTTGTATATTCTTTGCTGAC CCTTTTAGAGGAAGAATCAGAAATAGCCAAATTGCTAACAAATACCCATCATAAGTACAG CGTCCCTCCTGTGAACTTCCTGCCAGTGTCCTCTGGGACCAGAATAAATAATCCTGTCTG CCGTAAACCAGTGATTCCAAGTAATTCTTTTGTTTCAAGTCAAATTCCAGAAGTTGAAAA AGAATCAGAACCTGAGGAGGAGACAGATGAGGATGAAGGTCCTGCACCAGTTATGGTGGA GAATGAAAGCTATGTCAACCTTAAGAAAAAGATTTCCAAAAGATATGACTGGCAGGCAAA ATCAGTACATGCCGAAAATGCTAAAATCTGCAAGCAGTTCCGAATAAAACAGGCTTCCAG ACAGTTCCAGTCAATTCTGCAGGAAAGACAATCACTCCCTGCTTGGGAAGAAAGAGAAAA CATTCTTAAATTGTTGAGCAAGCACCAAGTGCTTGTTGTAAGTGGTATGACTGGATGTGG GAAAACCTCACAGATTCCACAGTTTATTCTGGATGATTCTCTGAATGGGCCACCTGAGAA GGTGGCTAACATCGTCTGTACCCAACCCCGACGAATCTCTGGCATCTCTGTTGCCGAACG TGTGGCTAAAGAAAGAGCAGAAAGAGTGGGTC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 534-652, - strand, RNAz p=0.507878 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 534-652, - strand, RNAz p=0.507878 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-260, gnl|bosTau2|chr11 (15908644-15908903) | |
| 1-260, gnl|Hg17|chr2 (39000024-38999765) | |
| 1-260, gnl|Mm7|chr17 (78570709-78570452) | |
| 534-692, gnl|bosTau2|chr11 (15913289-15913447) | |
| 534-692, gnl|canFam2|chr17 (33992846-33993061) | |
| 534-692, gnl|danRer3|chrNA (246700905-246701127) | |
| 534-692, gnl|dasNov1|scaffold_23231 (9709-9494) | |
| 534-692, gnl|echTel1|scaffold_310270 (115490-115660) | |
| 534-692, gnl|fr1|chrUn (280162980-280162761) | |
| 534-692, gnl|galGal2|chrUn (159241212-159241425) | |
| 534-692, gnl|hg17|chr2 (38993838-38994053) | |
| 534-692, gnl|Hg17|chr2 (38994046-38993888) | |
| 534-692, gnl|loxAfr1|scaffold_83553 (5099-4934) | |
| 534-692, gnl|mm7|chr17 (78564453-78564668) | |
| 534-692, gnl|Mm7|chr17 (78564661-78564503) | |
| 534-692, gnl|monDom2|scaffold_23 (42090915-42091130) | |
| 534-692, gnl|oryCun1|scaffold_204831 (15069-14854) | |
| 534-692, gnl|panTro1|chr12 (40488601-40488816) | |
| 534-692, gnl|rheMac2|chr13 (38842453-38842668) | |
| 534-692, gnl|rn3|chr6 (3170857-3171072) | |
| 534-692, gnl|tetNig1|chr19 (4804536-4804744) | |
| 534-692, gnl|xenTro1|scaffold_41 (580601-580814) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-260, gnl|bosTau2|chr11 (15908644-15908903) | |
| 1-260, gnl|Hg17|chr2 (39000024-38999765) | |
| 1-260, gnl|Mm7|chr17 (78570709-78570452) | |
| 534-692, gnl|bosTau2|chr11 (15913289-15913447) | |
| 534-692, gnl|canFam2|chr17 (33992846-33993061) | |
| 534-692, gnl|danRer3|chrNA (246700905-246701127) | |
| 534-692, gnl|dasNov1|scaffold_23231 (9709-9494) | |
| 534-692, gnl|echTel1|scaffold_310270 (115490-115660) | |
| 534-692, gnl|fr1|chrUn (280162980-280162761) | |
| 534-692, gnl|galGal2|chrUn (159241212-159241425) | |
| 534-692, gnl|hg17|chr2 (38993838-38994053) | |
| 534-692, gnl|Hg17|chr2 (38994046-38993888) | |
| 534-692, gnl|loxAfr1|scaffold_83553 (5099-4934) | |
| 534-692, gnl|mm7|chr17 (78564453-78564668) | |
| 534-692, gnl|Mm7|chr17 (78564661-78564503) | |
| 534-692, gnl|monDom2|scaffold_23 (42090915-42091130) | |
| 534-692, gnl|oryCun1|scaffold_204831 (15069-14854) | |
| 534-692, gnl|panTro1|chr12 (40488601-40488816) | |
| 534-692, gnl|rheMac2|chr13 (38842453-38842668) | |
| 534-692, gnl|rn3|chr6 (3170857-3171072) | |
| 534-692, gnl|tetNig1|chr19 (4804536-4804744) | |
| 534-692, gnl|xenTro1|scaffold_41 (580601-580814) |