Non-Coding RNA Search

Ova1-OVRM10086E03

Sequence:


               
               ATGTTTTTCCTATCACCATTATGTTTATTAAAGGAAAATTTTCTATGGCAGTGGTAAGCA
GATTCCAGGTTGAGTGTGAACAGATTAAATCCACAACTTCCAGTAAAAAAAACTTGAGTG
CCTTAAAGCAAGGCAAATATGAAAGTACCAGAAAACGAGGACTTTTTACACAGTGTCCAT
TATTTCCAATCTTCATCCACATAAGCAATGCTTATGTAAAATGAAAACGATAAAAATAAC
TGATTTACCATGACAGGAAAAGCCCCACGAGGATAGAGTTATCCTTCTGGTTTCCTCCAT
TGGCAGTCTCCACACTTCAGAAGAACTGGCAAGCTACAATTGGCACTTGAAAAAGTGTTA
CAAAACACTGACAAGTATTAGAGAAATGTTGATTCATGTAAACAGCCTGCCCCAATACCT
TTCTTAAGAAAACTGGTTTTCTAATTAGCATTTCTATGGAGACAGGTATCTCTAGGTAAC
TGCAGGAAGTGTTTCCAGAAGTTATTTGCCTTTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGTTTTTCCTATCACCATTATGTTTATTAAAGGAAAATTTTCTATGGCAGTGGTAAGCA
GATTCCAGGTTGAGTGTGAACAGATTAAATCCACAACTTCCAGTAAAAAAAACTTGAGTG
CCTTAAAGCAAGGCAAATATGAAAGTACCAGAAAACGAGGACTTTTTACACAGTGTCCAT
TATTTCCAATCTTCATCCACATAAGCAATGCTTATGTAAAATGAAAACGATAAAAATAAC
TGATTTACCATGACAGGAAAAGCCCCACGAGGATAGAGTTATCCTTCTGGTTTCCTCCAT
TGGCAGTCTCCACACTTCAGAAGAACTGGCAAGCTACAATTGGCACTTGAAAAAGTGTTA
CAAAACACTGACAAGTATTAGAGAAATGTTGATTCATGTAAACAGCCTGCCCCAATACCT
TTCTTAAGAAAACTGGTTTTCTAATTAGCATTTCTATGGAGACAGGTATCTCTAGGTAAC
TGCAGGAAGTGTTTCCAGAAGTTATTTGCCTTTGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               300-415, - strand, RNAz p=0.578401

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               300-415, - strand, RNAz p=0.578401

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-515, gnl|bosTau2|chr13 (35653049-35653566)
               

               
               2-515, gnl|Hg17|chr9 (81543473-81543989)
               

               
               2-515, gnl|Mm7|chr4 (71645618-71646058)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-515, gnl|bosTau2|chr13 (35653049-35653566)
               

               
               2-515, gnl|Hg17|chr9 (81543473-81543989)
               

               
               2-515, gnl|Mm7|chr4 (71645618-71646058)

	2-515, gnl\|bosTau2\|chr13 (35653049-35653566)
	2-515, gnl\|Hg17\|chr9 (81543473-81543989)
	2-515, gnl\|Mm7\|chr4 (71645618-71646058)