Non-Coding RNA Search

Ova1-OVRM10087A07

Sequence:


               
               ACTTCCCCCAACTCCGCCAACTAAGTTGCACTCTCACCGTGAGGCGCCCCGGGGCTCCCC
CGCGGGCCAAGCCGGAGCAGCTCCGCACCCTCGCCGCGGAGAAAGACAATAGTTAGCCGC
TCTTCCGGCGGCAGCAGCAGAGGTGGTGGCGACGGCCCGAAACTGCGGCGACGGAGGCAA
GGAGCCGGCACGGTGGTCTCGGCGGAGCCCGGGCGTTTCACCGCGGCGGCTCCGGCTCGG
GGCTGGCCCTGCACACAGCCCCAACCCGCCCGCGCATGCGCCACAAGCCGCTCGGGAATG
GGCGGGGCACCGGAGGAGGACGGTAAGGCTTAAGCGCCCTCCCATGAATAAGCGCGGAGC
CAGGGGCCGCTAGCTGGGATTGCACGGCAGAGCTGCCTATCAAGATCCGTGAGACCAATA
GTGAGGTACATGGGCGGTGCCCTCAGGTTGCTAAGGAAGGCTGAGGTTGACCGCCGCCGC
TCCGCTGCGGTAAAGTGATCAAAGTCGGGTACCGTGTGGAGGTGCCTGACTGAAATGCTC
ATCCACCCTCACCTCTCTGCCCTGTTTCGGGAAACCGCCCTTCCTCTGTGTGTGTGTCGG
AGGGAGATGCTTACCTAAAATGTAGCACTTGCTGTAACACAAGTGAAATCATTTACTCTT
TACTTCCCTCCNACTTGAATTAGAAAGTGGGTCTTTTCTGTGTCCTGTNGCCTAAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTCCCCCAACTCCGCCAACTAAGTTGCACTCTCACCGTGAGGCGCCCCGGGGCTCCCC
CGCGGGCCAAGCCGGAGCAGCTCCGCACCCTCGCCGCGGAGAAAGACAATAGTTAGCCGC
TCTTCCGGCGGCAGCAGCAGAGGTGGTGGCGACGGCCCGAAACTGCGGCGACGGAGGCAA
GGAGCCGGCACGGTGGTCTCGGCGGAGCCCGGGCGTTTCACCGCGGCGGCTCCGGCTCGG
GGCTGGCCCTGCACACAGCCCCAACCCGCCCGCGCATGCGCCACAAGCCGCTCGGGAATG
GGCGGGGCACCGGAGGAGGACGGTAAGGCTTAAGCGCCCTCCCATGAATAAGCGCGGAGC
CAGGGGCCGCTAGCTGGGATTGCACGGCAGAGCTGCCTATCAAGATCCGTGAGACCAATA
GTGAGGTACATGGGCGGTGCCCTCAGGTTGCTAAGGAAGGCTGAGGTTGACCGCCGCCGC
TCCGCTGCGGTAAAGTGATCAAAGTCGGGTACCGTGTGGAGGTGCCTGACTGAAATGCTC
ATCCACCCTCACCTCTCTGCCCTGTTTCGGGAAACCGCCCTTCCTCTGTGTGTGTGTCGG
AGGGAGATGCTTACCTAAAATGTAGCACTTGCTGTAACACAAGTGAAATCATTTACTCTT
TACTTCCCTCCNACTTGAATTAGAAAGTGGGTCTTTTCTGTGTCCTGTNGCCTAAAGA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               40-159, - strand, RNAz p=0.518489

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-159, - strand, RNAz p=0.518489

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-698, gnl|bosTau2|chr21 (9483800-9483133)
               

               
               1-698, gnl|Hg17|chr15 (83725070-83724402)
               

               
               1-698, gnl|Mm7|chr7 (71307779-71307201)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-698, gnl|bosTau2|chr21 (9483800-9483133)
               

               
               1-698, gnl|Hg17|chr15 (83725070-83724402)
               

               
               1-698, gnl|Mm7|chr7 (71307779-71307201)

	1-698, gnl\|bosTau2\|chr21 (9483800-9483133)
	1-698, gnl\|Hg17\|chr15 (83725070-83724402)
	1-698, gnl\|Mm7\|chr7 (71307779-71307201)