Non-Coding RNA Search

Ova1-OVRM10087E09

Sequence:


               
               TATGCGGCAGGTGTGGCCCTaaaaagcaaaaaaaaaaaaaaaaaattaaaaaaaaaaaaa
gaaaagccgttgaggaagaaaatgttgctacactgtgcacaattcggcagcacacatact
aaaattggaacgatatagagaagattagcatggcccctgtgcaaggatgacacacaaatt
cgtgaagcattccatgtttttaaaaaaagaaaaaagaaaatgttgctataaaactgaaga
aacagagttcctgtcatggctcagcggttaacgaatctcactaacatccattaggatgca
ggttcagtcccaggccttgctcagtgggttaaggatctggtgttgctgtgagctgtggtg
taggttgcagatgtgactcagatcctgtgttgctgtggctgtggtgtaggccagcagcta
cagttccaatttgacccctagcctgggaacctccatttgccacgggtgctgccctAAAAA
GAAAAAAAAAAAACTGAAGAAACAAGGTGATTATGTTAAAAGAAATGTAGTTGAAATTGT
AGTGAATTGGTCAGTTCTTGACCACAAGCACAAAATCCATTCAATGTGGTTTAAACCCAC
AGGGTTTATTGAGGTATACAGATAACTCGAAGAATAAGTAATTACCTGATTTCCCAGAAA
TACATCCCAAAACCCGACTGCAGAACTGTACCATTGTGATGCTGTTGCCTGTGCTGGGAG
CAGGAACTGCTGAGTGAGGCTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATGCGGCAGGTGTGGCCCTaaaaagcaaaaaaaaaaaaaaaaaattaaaaaaaaaaaaa
gaaaagccgttgaggaagaaaatgttgctacactgtgcacaattcggcagcacacatact
aaaattggaacgatatagagaagattagcatggcccctgtgcaaggatgacacacaaatt
cgtgaagcattccatgtttttaaaaaaagaaaaaagaaaatgttgctataaaactgaaga
aacagagttcctgtcatggctcagcggttaacgaatctcactaacatccattaggatgca
ggttcagtcccaggccttgctcagtgggttaaggatctggtgttgctgtgagctgtggtg
taggttgcagatgtgactcagatcctgtgttgctgtggctgtggtgtaggccagcagcta
cagttccaatttgacccctagcctgggaacctccatttgccacgggtgctgccctAAAAA
GAAAAAAAAAAAACTGAAGAAACAAGGTGATTATGTTAAAAGAAATGTAGTTGAAATTGT
AGTGAATTGGTCAGTTCTTGACCACAAGCACAAAATCCATTCAATGTGGTTTAAACCCAC
AGGGTTTATTGAGGTATACAGATAACTCGAAGAATAAGTAATTACCTGATTTCCCAGAAA
TACATCCCAAAACCCGACTGCAGAACTGTACCATTGTGATGCTGTTGCCTGTGCTGGGAG
CAGGAACTGCTGAGTGAGGCTGC

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               95-201, RF00026;U6; (AC126694.4/133507-133630), RaveNnA Score=113.49

ncRNA annotation: 1 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               95-201, RF00026;U6; (AC126694.4/133507-133630), RaveNnA Score=113.49