Non-Coding RNA Search

Ova1-OVRM10089G08

Sequence:


               
               TACTGGTTTAATGGTTGTATAACATTTCATCTTAGAGAGTATATCAAATTCTGTAAAGTT
ATTTTATTGGGCATTAATTTAAGCTAAAAGATGTATAAAACACTTTAAAGTTTCTGATAA
ATATAATCATGATGCCTTCCAGGAGGGTTGTACCAGGCTACCCTCACCGTCAGTGGATGA
TAATTTTTTTTTGCCACCCCACAGCATATGGAATTCCTGGGCCAGGGGTCAGATCTAAAC
TGCAGTCAGATCTAAGCCACAGCTGCAGAAATGCCAGATCCACTGTGCCAGGCTAGGGCT
CAAATGCATGTCCCGCGCTCCCAAGCTGCTGCCAGTGCTGTTGTTATCGGGAGCTCCTGA
TAATGGTTTTTTTTTTTTGGCCAGTTTTATATTATGACCTTAGTCATAATGGAAATGTTA
TATGTTTATTTTTTTCTTAGACATGTTCATTTTCCTAGACTGACTGTCGTTCAGTTTATT
TGATCTAAGCTTAAGCTGTTTTGGACAAGTGTACCAATGCTGTCCTTTTCTAAATGAAGA
CTACCACTTACAACGCATTGTGAATGAATGTGTTATCCGTGTTCCCCATACTTCTCTCCA
GCTGGTTCCTGAAGGTTCTTAACATTCAAATAGAATGGCTTTTTGCCAGCACAAATTGAC
ACTTAACCCACAATAGTGTATTTTGTTTTCTTGTTAGTTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACTGGTTTAATGGTTGTATAACATTTCATCTTAGAGAGTATATCAAATTCTGTAAAGTT
ATTTTATTGGGCATTAATTTAAGCTAAAAGATGTATAAAACACTTTAAAGTTTCTGATAA
ATATAATCATGATGCCTTCCAGGAGGGTTGTACCAGGCTACCCTCACCGTCAGTGGATGA
TAATTTTTTTTTGCCACCCCACAGCATATGGAATTCCTGGGCCAGGGGTCAGATCTAAAC
TGCAGTCAGATCTAAGCCACAGCTGCAGAAATGCCAGATCCACTGTGCCAGGCTAGGGCT
CAAATGCATGTCCCGCGCTCCCAAGCTGCTGCCAGTGCTGTTGTTATCGGGAGCTCCTGA
TAATGGTTTTTTTTTTTTGGCCAGTTTTATATTATGACCTTAGTCATAATGGAAATGTTA
TATGTTTATTTTTTTCTTAGACATGTTCATTTTCCTAGACTGACTGTCGTTCAGTTTATT
TGATCTAAGCTTAAGCTGTTTTGGACAAGTGTACCAATGCTGTCCTTTTCTAAATGAAGA
CTACCACTTACAACGCATTGTGAATGAATGTGTTATCCGTGTTCCCCATACTTCTCTCCA
GCTGGTTCCTGAAGGTTCTTAACATTCAAATAGAATGGCTTTTTGCCAGCACAAATTGAC
ACTTAACCCACAATAGTGTATTTTGTTTTCTTGTTAGTTAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               584-701, + strand, RNAz p=0.804086

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               584-701, + strand, RNAz p=0.804086

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               374-701, gnl|bosTau2|chr19 (37472271-37472604)
               

               
               374-701, gnl|Hg17|chr17 (40254282-40253953)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               374-701, gnl|bosTau2|chr19 (37472271-37472604)
               

               
               374-701, gnl|Hg17|chr17 (40254282-40253953)

	374-701, gnl\|bosTau2\|chr19 (37472271-37472604)
	374-701, gnl\|Hg17\|chr17 (40254282-40253953)