Non-Coding RNA Search

Ova1-OVRM10090C05

Sequence:


               
               CTGGAAATGAAGACAAAGAAGACTAAGTAGATGCAGAATTTCTGATTTTCCTCTTATTTA
TATTTTTGCCACCTGATTTAGCTAAACAAAGCCATATACTGTTCTGGACTGTCATTCTTA
AAATATCATGCTTTATAAAATGAGTGACCATAAGTCACAATATGGGACAGTCTCATTGTT
TTTCTGTAATTATCAAAAACTTGTTTCACTCTCAAAAAATGTACTAGCTTGGATGACAAA
GTATATATGGTCACCTATTGAACTATGTGGTCAAATTGATATTGGAAGGGATGTTTTAGT
AAAACATTTAATTTTAAATTTCTAAAAGTACTATCTGAAAGAATTAGTGTTAAATTCAGT
AAAGTCCTTGGTTCTTGGTTCATATTCTTTTTTTAACTTGGAAATAAGACCATTTTGTGG
TTTCTCAAGTCAAGAAATAGTCTTGACTAACTCCATTATGGTCATTCAATTCTAACACTT
GGAACGTGGATGGTATTTCTCATTTACTAAGAGATAGTGATAGAATAGATTGTTGAATTT
TACTAGTGCTACTCTATGAAGCAGGAAATGTTGTTGAATAAAGTACAGGATCCAGCATAA
TGATAATATGTGTGCCTGTGATCTTACAGAGGCACAGGAGATCATGATCAAGGAGAATCT
TTAGTCCTCAGATGTTGAAAAGAATATTTGAGAACCATGGCCCTCAGTACTAACATAAGG
GAACAATCACCAGAATTTTGTGCATAATATCCAGACTTACTTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGAAATGAAGACAAAGAAGACTAAGTAGATGCAGAATTTCTGATTTTCCTCTTATTTA
TATTTTTGCCACCTGATTTAGCTAAACAAAGCCATATACTGTTCTGGACTGTCATTCTTA
AAATATCATGCTTTATAAAATGAGTGACCATAAGTCACAATATGGGACAGTCTCATTGTT
TTTCTGTAATTATCAAAAACTTGTTTCACTCTCAAAAAATGTACTAGCTTGGATGACAAA
GTATATATGGTCACCTATTGAACTATGTGGTCAAATTGATATTGGAAGGGATGTTTTAGT
AAAACATTTAATTTTAAATTTCTAAAAGTACTATCTGAAAGAATTAGTGTTAAATTCAGT
AAAGTCCTTGGTTCTTGGTTCATATTCTTTTTTTAACTTGGAAATAAGACCATTTTGTGG
TTTCTCAAGTCAAGAAATAGTCTTGACTAACTCCATTATGGTCATTCAATTCTAACACTT
GGAACGTGGATGGTATTTCTCATTTACTAAGAGATAGTGATAGAATAGATTGTTGAATTT
TACTAGTGCTACTCTATGAAGCAGGAAATGTTGTTGAATAAAGTACAGGATCCAGCATAA
TGATAATATGTGTGCCTGTGATCTTACAGAGGCACAGGAGATCATGATCAAGGAGAATCT
TTAGTCCTCAGATGTTGAAAAGAATATTTGAGAACCATGGCCCTCAGTACTAACATAAGG
GAACAATCACCAGAATTTTGTGCATAATATCCAGACTTACTTGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               604-718, - strand, RNAz p=0.967486

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               604-718, - strand, RNAz p=0.967486

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               6-759, gnl|bosTau2|chr10 (19681235-19680455)
               

               
               6-759, gnl|Hg17|chr15 (33380960-33380182)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-759, gnl|bosTau2|chr10 (19681235-19680455)
               

               
               6-759, gnl|Hg17|chr15 (33380960-33380182)

	6-759, gnl\|bosTau2\|chr10 (19681235-19680455)
	6-759, gnl\|Hg17\|chr15 (33380960-33380182)