Non-Coding RNA Search

Ova1-OVRM10093H08

Sequence:


               
               TTCAGTTTCGCTTTCCTCGAGATCCAGCGCGGTTCCAGGCAGAGCCGCCTCCCCTTCCTC
TCCTCCTTGTCCTCCTCGCCGCGGACTGCCAGAAAGGGGCTGCTGTATTTGGGAAACAGA
AAACGTAGTAAACATATAAAGACCCAAGAGACCTGGAGGATGGATTTTCTTAAGGGTGTT
GGAGCAGCAGCTTACAAGGAGAAATCAGAGACTGATATCCTCCAAGAAAACTACAGTCAG
CAAATTACCCTTCATCACAATGACCTCAAAATTTTAAAAAGTAATGAGAATCAGCTGTGG
GAAATCCTCCAGAATAAATTTGACTGTATCTTTACCCTGGTCTCCCCAGCCCAGGAAGGT
AACAATGAGTCTCTACAGGTCTTCAGAAAAATGCTGACTCCCAGGCTAGAGTTATCTGTC
TGGAAGGCTGACCTCACCAGACACGCTGTGGATGCTGTGGTGAATGCAGCCAATGAAGAC
CTCACACATGGCGGGGGCCTGGCCCAGGCTCTTGTGAAAGCTGGCGGCGTGGAAATCCAA
GAGGAGAGCCGAAAGTGGATTTCTGAATTTAGCAAAGTACCCACGGGTGAGGTAGCTGTC
A

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCAGTTTCGCTTTCCTCGAGATCCAGCGCGGTTCCAGGCAGAGCCGCCTCCCCTTCCTC
TCCTCCTTGTCCTCCTCGCCGCGGACTGCCAGAAAGGGGCTGCTGTATTTGGGAAACAGA
AAACGTAGTAAACATATAAAGACCCAAGAGACCTGGAGGATGGATTTTCTTAAGGGTGTT
GGAGCAGCAGCTTACAAGGAGAAATCAGAGACTGATATCCTCCAAGAAAACTACAGTCAG
CAAATTACCCTTCATCACAATGACCTCAAAATTTTAAAAAGTAATGAGAATCAGCTGTGG
GAAATCCTCCAGAATAAATTTGACTGTATCTTTACCCTGGTCTCCCCAGCCCAGGAAGGT
AACAATGAGTCTCTACAGGTCTTCAGAAAAATGCTGACTCCCAGGCTAGAGTTATCTGTC
TGGAAGGCTGACCTCACCAGACACGCTGTGGATGCTGTGGTGAATGCAGCCAATGAAGAC
CTCACACATGGCGGGGGCCTGGCCCAGGCTCTTGTGAAAGCTGGCGGCGTGGAAATCCAA
GAGGAGAGCCGAAAGTGGATTTCTGAATTTAGCAAAGTACCCACGGGTGAGGTAGCTGTC
A

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               325-481, - strand, RNAz p=0.961727

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               325-481, - strand, RNAz p=0.961727

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               206-601, gnl|bosTau2|chr1 (39317575-39317970)
               

               
               206-601, gnl|Hg17|chr3 (123757661-123757266)
               

               
               206-601, gnl|Mm7|chr16 (35621711-35622109)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               206-601, gnl|bosTau2|chr1 (39317575-39317970)
               

               
               206-601, gnl|Hg17|chr3 (123757661-123757266)
               

               
               206-601, gnl|Mm7|chr16 (35621711-35622109)

	206-601, gnl\|bosTau2\|chr1 (39317575-39317970)
	206-601, gnl\|Hg17\|chr3 (123757661-123757266)
	206-601, gnl\|Mm7\|chr16 (35621711-35622109)