Non-Coding RNA Search

Ova1-OVRM10098F05

Sequence:


               
               ATTAGTTTCAAACTGCGGAGGAGAAAAGGAGGGAACCGTTGGGGTTCTCATTTTTCTGCC
CTCCCAAGCTCCAGAGGCCCACCCCCTCCCCACCTGATTTGCATCCTCAGCTCAATTTGC
ATCACAAAATACACCCAAACTTCCCTGGACCCGCTGCCGTAGGCGGGCAAGTTGTGTTTT
TTTGTTTTGTTTGGGTTTTTCATCTCCTGCCATTTCTCTAGCAGGTTTCTGGTTACATCC
AGATGACACTTAGATTAGGTTTCACTTTACGTCCTTGGCCTGTGATTCAACTAGCCCCTC
CTCCTGGGCCAGAGCCCCTGCAAGATCAAGCCCCATCCCAGGGCCATGGCTTGGGAGGCA
GCCCTGCAGGCCATCCTGCTTCTCACACTCACTCGCGCCTCTTCACGACCCGTAGGCCCT
GCAGCTGTGTGTCCTTCAGCGAGACACTCCAGGGTTGGAGCCTTTTTTTTCTTTTTTTCT
CTTTCCTTTTCCCCCAAACCCGGAATCAATATTTTGGGAGTAAAGGTGGGGAAGGGGAGG
TCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTAGTTTCAAACTGCGGAGGAGAAAAGGAGGGAACCGTTGGGGTTCTCATTTTTCTGCC
CTCCCAAGCTCCAGAGGCCCACCCCCTCCCCACCTGATTTGCATCCTCAGCTCAATTTGC
ATCACAAAATACACCCAAACTTCCCTGGACCCGCTGCCGTAGGCGGGCAAGTTGTGTTTT
TTTGTTTTGTTTGGGTTTTTCATCTCCTGCCATTTCTCTAGCAGGTTTCTGGTTACATCC
AGATGACACTTAGATTAGGTTTCACTTTACGTCCTTGGCCTGTGATTCAACTAGCCCCTC
CTCCTGGGCCAGAGCCCCTGCAAGATCAAGCCCCATCCCAGGGCCATGGCTTGGGAGGCA
GCCCTGCAGGCCATCCTGCTTCTCACACTCACTCGCGCCTCTTCACGACCCGTAGGCCCT
GCAGCTGTGTGTCCTTCAGCGAGACACTCCAGGGTTGGAGCCTTTTTTTTCTTTTTTTCT
CTTTCCTTTTCCCCCAAACCCGGAATCAATATTTTGGGAGTAAAGGTGGGGAAGGGGAGG
TCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               421-540, + strand, RNAz p=0.976664

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               421-540, + strand, RNAz p=0.976664

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               25-540, gnl|bosTau2|chr24 (44637097-44636608)
               

               
               25-540, gnl|Hg17|chr18 (58957148-58956648)
               

               
               25-540, gnl|Mm7|chr1 (106449770-106449287)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               25-540, gnl|bosTau2|chr24 (44637097-44636608)
               

               
               25-540, gnl|Hg17|chr18 (58957148-58956648)
               

               
               25-540, gnl|Mm7|chr1 (106449770-106449287)

	25-540, gnl\|bosTau2\|chr24 (44637097-44636608)
	25-540, gnl\|Hg17\|chr18 (58957148-58956648)
	25-540, gnl\|Mm7\|chr1 (106449770-106449287)