Non-Coding RNA Search

Ova1-OVRM10102G09

Sequence:


               
               CAACCTACTACTGTCTGCGAGTCGGCACTAGTCCAGGGAGTTTCAAAGGGATGTTTCATT
GATTCTGTAACTGTGCAGGAGAATGGACAAGCTGAGCTGAACCTCAGGGCCAGGAAAACC
CCTGTTCTACCAACAGCTCCCACTCGAGCTGGGGTTTGGATAAGAGCTCGCGGAGCAGTC
ACAGCTCAAGGTGAAGTGTACACTTAACCCTTTCTCTGAGGCCCCCCTTCAAGTTTCTTT
TGTGTGCAAGTGTGTCCGGGCCACGTCTCTTTGCAAGAATTTCAGACCTTTAATTTCCTT
TGCATCTTGTAATGGGCCCTATTATTGTTTTACGGCTCTGCCTCTCCAAGGGCTGTTGTC
AAACCTTGGGTGTGAAAGCGGGTTCATACAGGAGCCTCTTCAGAACAATGTGCTTTCAAG
AGGAACTTCTCATGAGATGAAAACCATAAAGCAGGCTTCTGAACAAGACTGCAAGACAGT
AGCCCATTCTCTGCTAATAAGCTGATTGTTTTCCAGACCTGAAGGGGTGGACCAAGCTGT
TTTGCCAAAACAATTGAAAATTAGCTCTGTAAACTTTTACTGCTGCCATATTTTGCACTG
GCATTCATCTCTGTACTGTTCCATTCATTTGGTCAGAGCTGGAAACACTTGGAAAGGGCA
TTTTTAAGACNAAAAAGGAATTACAGAATGTCTCACTCAGGGGTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAACCTACTACTGTCTGCGAGTCGGCACTAGTCCAGGGAGTTTCAAAGGGATGTTTCATT
GATTCTGTAACTGTGCAGGAGAATGGACAAGCTGAGCTGAACCTCAGGGCCAGGAAAACC
CCTGTTCTACCAACAGCTCCCACTCGAGCTGGGGTTTGGATAAGAGCTCGCGGAGCAGTC
ACAGCTCAAGGTGAAGTGTACACTTAACCCTTTCTCTGAGGCCCCCCTTCAAGTTTCTTT
TGTGTGCAAGTGTGTCCGGGCCACGTCTCTTTGCAAGAATTTCAGACCTTTAATTTCCTT
TGCATCTTGTAATGGGCCCTATTATTGTTTTACGGCTCTGCCTCTCCAAGGGCTGTTGTC
AAACCTTGGGTGTGAAAGCGGGTTCATACAGGAGCCTCTTCAGAACAATGTGCTTTCAAG
AGGAACTTCTCATGAGATGAAAACCATAAAGCAGGCTTCTGAACAAGACTGCAAGACAGT
AGCCCATTCTCTGCTAATAAGCTGATTGTTTTCCAGACCTGAAGGGGTGGACCAAGCTGT
TTTGCCAAAACAATTGAAAATTAGCTCTGTAAACTTTTACTGCTGCCATATTTTGCACTG
GCATTCATCTCTGTACTGTTCCATTCATTTGGTCAGAGCTGGAAACACTTGGAAAGGGCA
TTTTTAAGACNAAAAAGGAATTACAGAATGTCTCACTCAGGGGTGGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               470-586, - strand, RNAz p=0.580369

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               470-586, - strand, RNAz p=0.580369

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-707, gnl|bosTau2|chr22 (24278790-24279469)
               

               
               1-707, gnl|Hg17|chr3 (71560865-71560130)
               

               
               1-707, gnl|Mm7|chr6 (99463337-99462665)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-707, gnl|bosTau2|chr22 (24278790-24279469)
               

               
               1-707, gnl|Hg17|chr3 (71560865-71560130)
               

               
               1-707, gnl|Mm7|chr6 (99463337-99462665)

	1-707, gnl\|bosTau2\|chr22 (24278790-24279469)
	1-707, gnl\|Hg17\|chr3 (71560865-71560130)
	1-707, gnl\|Mm7\|chr6 (99463337-99462665)