Non-Coding RNA Search

Ova1-OVRM10104B04

Sequence:


               
               CTAAGCTATAAAACCAAGATGATCACATAAAAGTTATACTTTCCATGTGATGATAAACAC
AAGGAAGGGCACAAGGATCAACATGAAGATGTAAAAAAGGTCATCAAAATCATAAAAGGT
GGGAACAAAGAATAAGAAAATACAGACTCTTTAAAAAATGTGTTTGAGGCTATATGACTA
TCAGCCTAAAGCAAGCAGATATAGGAGGGGATTAACATACTTGAAAAACAGGGCGACCAC
AAACCAAAAAAAACATTCAGTAGAGTCACAAAAACTACAAAGAAGAGAACAGAAGCATAA
AATAAAAGGAACTCATAAAACCACAGAAAGAAAAAGAAAGGGACAAAGAAGAAACATAGA
AGCAACTGTAAAACAAGTATCAATAActtaaatgtcaatgggctgaatattccagtcaaa
agatagagagtgatagactggataaaaaacaagaggctacaatatgctgcctacaagaga
ctctcctggggacacacatagactgaaagtgaggggatggaaaaagaaatttcatgcaaa
cagaaatgaaaggaaaccaggagttgcaatattcatatcagaccaaatagactttaaaaa
caaaatcaataaagaaaaaggatactatataatcataaaaagatcaatacaagaagagga
ttttacactcatccacacatttgcacataatatatgagcaTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTAAGCTATAAAACCAAGATGATCACATAAAAGTTATACTTTCCATGTGATGATAAACAC
AAGGAAGGGCACAAGGATCAACATGAAGATGTAAAAAAGGTCATCAAAATCATAAAAGGT
GGGAACAAAGAATAAGAAAATACAGACTCTTTAAAAAATGTGTTTGAGGCTATATGACTA
TCAGCCTAAAGCAAGCAGATATAGGAGGGGATTAACATACTTGAAAAACAGGGCGACCAC
AAACCAAAAAAAACATTCAGTAGAGTCACAAAAACTACAAAGAAGAGAACAGAAGCATAA
AATAAAAGGAACTCATAAAACCACAGAAAGAAAAAGAAAGGGACAAAGAAGAAACATAGA
AGCAACTGTAAAACAAGTATCAATAActtaaatgtcaatgggctgaatattccagtcaaa
agatagagagtgatagactggataaaaaacaagaggctacaatatgctgcctacaagaga
ctctcctggggacacacatagactgaaagtgaggggatggaaaaagaaatttcatgcaaa
cagaaatgaaaggaaaccaggagttgcaatattcatatcagaccaaatagactttaaaaa
caaaatcaataaagaaaaaggatactatataatcataaaaagatcaatacaagaagagga
ttttacactcatccacacatttgcacataatatatgagcaTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61886575|ref|XP_586939.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61886575|ref|XP_586939.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               397-501, - strand, RNAz p=0.581302

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               397-501, - strand, RNAz p=0.581302

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               47-700, gnl|bosTau2|chr20 (18325145-18324465)
               


               
               179-681, gnl|bosTau2|chr10 (11820951-11821485)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               47-700, gnl|bosTau2|chr20 (18325145-18324465)
               


               
               179-681, gnl|bosTau2|chr10 (11820951-11821485)

	47-700, gnl\|bosTau2\|chr20 (18325145-18324465)

	179-681, gnl\|bosTau2\|chr10 (11820951-11821485)