Non-Coding RNA Search

Ova1-OVRM10104D10

Sequence:


               
               ATTGGCTGTGAGGGTTGAATGTAAGATGGCGCCCAGGGAGCTGTGAGGGGAAAATCCTGT
CGGTCTCGGAGCGGCGACGGCAGAACCGGGGCCCCGAGCGGTGCGGCGGGGCCGGCGGGT
AGAACGGCGGCGGCGGCGGCGGCGACGTCGCCCGGAATCTTAAGGACTCTGCAATATGAA
TAATTCCCTGGAGAACACCATCTCCTTTGAAGAGTACATCCGAGTGAAGGCGCGGTCTGT
CCCGCAACACAGGATGAAGGAATTTCTGGACTCACTAGCCTCTAAGGGGCCAGAAGCCCT
TCAGGAGTTCCAGCAGACAGCTACTACTACCATGGTGTACCAACAGGGTGGGAACTGCAT
TTACACAGACAGCACCGAAGTGGCCGGGTCTTTGCTAGAACTTGCCTGTCCAGTCACCAC
CAGTGTTCAGCCACAAACCCAGCAAGAACAGCAGATCCAGGTTCAGCAGCCACAGCAGGT
TCAGGTACAGGTGCAGGTACAACAGTCTCCGCAGCAGGTCTCGGCTCAGCAGCTCTCCCC
ACAACTCACCGTTCACCAGCCTGCAGAGCAGCCCATCCATGTCCAGGTGCAGATCCAAGG
CCAAGCAGCACAGCCGGCAGCCCCCTCCATCCAGACCCCATCTCTGCAGAGCCCTAGCCC
TTCACAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTGGCTGTGAGGGTTGAATGTAAGATGGCGCCCAGGGAGCTGTGAGGGGAAAATCCTGT
CGGTCTCGGAGCGGCGACGGCAGAACCGGGGCCCCGAGCGGTGCGGCGGGGCCGGCGGGT
AGAACGGCGGCGGCGGCGGCGGCGACGTCGCCCGGAATCTTAAGGACTCTGCAATATGAA
TAATTCCCTGGAGAACACCATCTCCTTTGAAGAGTACATCCGAGTGAAGGCGCGGTCTGT
CCCGCAACACAGGATGAAGGAATTTCTGGACTCACTAGCCTCTAAGGGGCCAGAAGCCCT
TCAGGAGTTCCAGCAGACAGCTACTACTACCATGGTGTACCAACAGGGTGGGAACTGCAT
TTACACAGACAGCACCGAAGTGGCCGGGTCTTTGCTAGAACTTGCCTGTCCAGTCACCAC
CAGTGTTCAGCCACAAACCCAGCAAGAACAGCAGATCCAGGTTCAGCAGCCACAGCAGGT
TCAGGTACAGGTGCAGGTACAACAGTCTCCGCAGCAGGTCTCGGCTCAGCAGCTCTCCCC
ACAACTCACCGTTCACCAGCCTGCAGAGCAGCCCATCCATGTCCAGGTGCAGATCCAAGG
CCAAGCAGCACAGCCGGCAGCCCCCTCCATCCAGACCCCATCTCTGCAGAGCCCTAGCCC
TTCACAGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61815886|ref|XP_592458.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61815886|ref|XP_592458.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               193-352, - strand, RNAz p=0.975193

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               193-352, - strand, RNAz p=0.975193

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               154-491, gnl|bosTau2|chr22 (40056975-40056638)
               

               
               154-491, gnl|Hg17|chr3 (49089476-49089139)
               

               
               154-491, gnl|Mm7|chr9 (102482258-102482595)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               154-491, gnl|bosTau2|chr22 (40056975-40056638)
               

               
               154-491, gnl|Hg17|chr3 (49089476-49089139)
               

               
               154-491, gnl|Mm7|chr9 (102482258-102482595)

	154-491, gnl\|bosTau2\|chr22 (40056975-40056638)
	154-491, gnl\|Hg17\|chr3 (49089476-49089139)
	154-491, gnl\|Mm7\|chr9 (102482258-102482595)