Non-Coding RNA Search

Ova1-OVRM10104F05

Sequence:


               
               TGTCAGTTGCAAGTGAGATGACACAAGCCCAGACTTTCTTCCTGAATCCTGTGTAAATCT
GCAGTGTTCATGAATTGCAGGGTACTTCATCTTTAAAGTGTGTGCATTGTGTCTGGGTCA
AAAAAGATGATGTTTTCTGAAACAACAGATCTTAGAATGGACATGGAAATTCTTCAGTAG
TTCATATAAAATTGAAACATATGCTTAAATAAAGATAAAAGTGCATAATATTTATCTGAA
ATATAAAATTACCTATCACATTCAGTTAAAATATATTTGTTTACCTATATATGTCACATT
TTGGTAGGGCTTATATTTAAAATATAAACATATATTTTGAAATGGACTTTCAGTTGAACA
CTTTCTATTTTCAGTAATGCAGAATCACTAATTATATAAACATTAATGCTGACTACAAAG
ATATCAAAAGCTTCTGGACATTTCTTTTTATCTCCTTGGCAATGTAGATATCAACTTAAA
AAGGCTAAATAGCATTATATATATATTTATGATACTTTTGAAAAACAAATAGAAGTTTTA
AATTCTAGCTAGTTAAATTCATAATTCAGATTTGTAGATGCAACAGTATTCATATGCTTA
ATGATGCACGATTTTTTAAATAGTTCATTAAAAATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTCAGTTGCAAGTGAGATGACACAAGCCCAGACTTTCTTCCTGAATCCTGTGTAAATCT
GCAGTGTTCATGAATTGCAGGGTACTTCATCTTTAAAGTGTGTGCATTGTGTCTGGGTCA
AAAAAGATGATGTTTTCTGAAACAACAGATCTTAGAATGGACATGGAAATTCTTCAGTAG
TTCATATAAAATTGAAACATATGCTTAAATAAAGATAAAAGTGCATAATATTTATCTGAA
ATATAAAATTACCTATCACATTCAGTTAAAATATATTTGTTTACCTATATATGTCACATT
TTGGTAGGGCTTATATTTAAAATATAAACATATATTTTGAAATGGACTTTCAGTTGAACA
CTTTCTATTTTCAGTAATGCAGAATCACTAATTATATAAACATTAATGCTGACTACAAAG
ATATCAAAAGCTTCTGGACATTTCTTTTTATCTCCTTGGCAATGTAGATATCAACTTAAA
AAGGCTAAATAGCATTATATATATATTTATGATACTTTTGAAAAACAAATAGAAGTTTTA
AATTCTAGCTAGTTAAATTCATAATTCAGATTTGTAGATGCAACAGTATTCATATGCTTA
ATGATGCACGATTTTTTAAATAGTTCATTAAAAATC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-119, + strand, RNAz p=0.707535

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-119, + strand, RNAz p=0.707535

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-634, gnl|bosTau2|chr27 (2072817-2073441)
               

               
               1-634, gnl|Hg17|chr4 (177394562-177395092)
               

               
               1-634, gnl|Mm7|chr8 (53469893-53469308)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-634, gnl|bosTau2|chr27 (2072817-2073441)
               

               
               1-634, gnl|Hg17|chr4 (177394562-177395092)
               

               
               1-634, gnl|Mm7|chr8 (53469893-53469308)

	1-634, gnl\|bosTau2\|chr27 (2072817-2073441)
	1-634, gnl\|Hg17\|chr4 (177394562-177395092)
	1-634, gnl\|Mm7\|chr8 (53469893-53469308)