Non-Coding RNA Search

Ova1-OVRM10105B03

Sequence:


               
               TTTGGAAAAATTGCTTACCCCCGTGGGCCTTGAATTGGATCATGTTGACTTGACCAAGTT
TAATGAACTTTTTCAAACTAATTTTAAAAAAAAACAAAACTCTACTTAAAAGTTTGAAAC
ATCAAAATGTTCTAGGAGTTTCCATCAGTTTGGCACATTTTCTCTGATAACGAAACTGAA
ATCCTTGGTAACTGCAACCAAGTCTTTATCTACTGCCTAGCCTAGCATAGCACTAGGTAT
ATAGTGTAGGCCCAAGCAATTGCTATGAAAGAGACCAAGCAATCACAACTTCATTCATTC
TCCTATTTCCCAAACTCATGCTTCCTTATCCCTCCTCCCCAGTTATTTCTGGTAATCTGT
AGGTATCTCTTGTGTTCAGGAATGTGTCCACACTCTGGGTGCCAATTTGGGCATTCATTG
TGCCCAAGCACCTTCTGTCATTACTGGTGCTCTGTCATGGCACTGCTGAGACCATTTAAT
CCCCTGGGGGCATTTTCATAGTGAAGTCCATAAAGTTGCAGAGCTTTATGGCATATCAAA
ATTAGTATGTATACACTTGTCCTTCGGTATCTACTGGGGAGTGGTTCCAGGAACGCTCAC
CTGCTCCCTGACCCATGGATACCCAAATCTGTGGATGCTCAATTCCCTTATGTAAAATGT
TGTAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGGAAAAATTGCTTACCCCCGTGGGCCTTGAATTGGATCATGTTGACTTGACCAAGTT
TAATGAACTTTTTCAAACTAATTTTAAAAAAAAACAAAACTCTACTTAAAAGTTTGAAAC
ATCAAAATGTTCTAGGAGTTTCCATCAGTTTGGCACATTTTCTCTGATAACGAAACTGAA
ATCCTTGGTAACTGCAACCAAGTCTTTATCTACTGCCTAGCCTAGCATAGCACTAGGTAT
ATAGTGTAGGCCCAAGCAATTGCTATGAAAGAGACCAAGCAATCACAACTTCATTCATTC
TCCTATTTCCCAAACTCATGCTTCCTTATCCCTCCTCCCCAGTTATTTCTGGTAATCTGT
AGGTATCTCTTGTGTTCAGGAATGTGTCCACACTCTGGGTGCCAATTTGGGCATTCATTG
TGCCCAAGCACCTTCTGTCATTACTGGTGCTCTGTCATGGCACTGCTGAGACCATTTAAT
CCCCTGGGGGCATTTTCATAGTGAAGTCCATAAAGTTGCAGAGCTTTATGGCATATCAAA
ATTAGTATGTATACACTTGTCCTTCGGTATCTACTGGGGAGTGGTTCCAGGAACGCTCAC
CTGCTCCCTGACCCATGGATACCCAAATCTGTGGATGCTCAATTCCCTTATGTAAAATGT
TGTAGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               330-595, + strand, RNAz p=0.974443

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               330-595, + strand, RNAz p=0.974443

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               32-664, gnl|bosTau2|chr3 (27334807-27335431)
               

               
               32-664, gnl|Hg17|chr1 (112879449-112879978)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               32-664, gnl|bosTau2|chr3 (27334807-27335431)
               

               
               32-664, gnl|Hg17|chr1 (112879449-112879978)

	32-664, gnl\|bosTau2\|chr3 (27334807-27335431)
	32-664, gnl\|Hg17\|chr1 (112879449-112879978)