Non-Coding RNA Search

Ova1-OVRM10109G12

Sequence:


               
               TTTATTCTTAAAAAAAATCTTTTTAAATACCTGAGTTTAAAATGAAAAGTGAGAATACAT
TAGAAAGAAAATCAAATTTACTGACTAAACTTTCAATCTGCTGTGGGAGAGAGGCTCTTT
CTGCTTTTTCCAATCATATGTTCCCATGTATCTGATCATGGAGGCCTGTAGAGAGACCAG
GAGAGTCTCCTGGTCTAGCCCTGGCTAGAGGGTTATCCAAAAATAGTGCCATATTGGGAC
TTAGCTGTGCAGACTTCTAGAAAATGGGTGTGCTCTAGTTATAAACCTGGGGTTTTAGAA
ATCTCACCATTTTCCCACAGAAATAAGTATTTAAAAGGAAAAGGAGCTATTTCAGGTGCC
ACTGAAATAACTGCTAGTACACGTGGTAGTGGTACAAAGACCTGTGAGGGAACGTCAAAG
AAAAGCTGTAGAGTACAGATGGTGAGACGTGCTGGAGAAGAGGTAGTAGACAGGAGTGGC
TAAGGCTGAAAATAGGTTTAAGGAAGAAAGTGTTTTTGTTCCTCAGGGTGGGGCAGAGAA
AATCTCTAATGCTTTGATGTAGTTTGCAGTAGCTGTCAGGTTATAAGTCACTTTCAGGTT
ATAAGTTTGTGAATCCAGGTTCTGTCTGTGGTATTATCGTGAGACAGCAGCTAAGTAGTG
AAACCATTTCTACTGAGATTTTGAACCAACATCAATACCCAAGAATTTTTTGTTAAATCC
TTTGGGCCTTAACATCACTTGGTGGTATTTGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTATTCTTAAAAAAAATCTTTTTAAATACCTGAGTTTAAAATGAAAAGTGAGAATACAT
TAGAAAGAAAATCAAATTTACTGACTAAACTTTCAATCTGCTGTGGGAGAGAGGCTCTTT
CTGCTTTTTCCAATCATATGTTCCCATGTATCTGATCATGGAGGCCTGTAGAGAGACCAG
GAGAGTCTCCTGGTCTAGCCCTGGCTAGAGGGTTATCCAAAAATAGTGCCATATTGGGAC
TTAGCTGTGCAGACTTCTAGAAAATGGGTGTGCTCTAGTTATAAACCTGGGGTTTTAGAA
ATCTCACCATTTTCCCACAGAAATAAGTATTTAAAAGGAAAAGGAGCTATTTCAGGTGCC
ACTGAAATAACTGCTAGTACACGTGGTAGTGGTACAAAGACCTGTGAGGGAACGTCAAAG
AAAAGCTGTAGAGTACAGATGGTGAGACGTGCTGGAGAAGAGGTAGTAGACAGGAGTGGC
TAAGGCTGAAAATAGGTTTAAGGAAGAAAGTGTTTTTGTTCCTCAGGGTGGGGCAGAGAA
AATCTCTAATGCTTTGATGTAGTTTGCAGTAGCTGTCAGGTTATAAGTCACTTTCAGGTT
ATAAGTTTGTGAATCCAGGTTCTGTCTGTGGTATTATCGTGAGACAGCAGCTAAGTAGTG
AAACCATTTCTACTGAGATTTTGAACCAACATCAATACCCAAGAATTTTTTGTTAAATCC
TTTGGGCCTTAACATCACTTGGTGGTATTTGGA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               127-241, + strand, RNAz p=0.812594

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               127-241, + strand, RNAz p=0.812594

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               11-747, gnl|bosTau2|chr3 (25895948-25895192)
               

               
               11-747, gnl|Hg17|chr1 (109821671-109822404)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-747, gnl|bosTau2|chr3 (25895948-25895192)
               

               
               11-747, gnl|Hg17|chr1 (109821671-109822404)

	11-747, gnl\|bosTau2\|chr3 (25895948-25895192)
	11-747, gnl\|Hg17\|chr1 (109821671-109822404)