Non-Coding RNA Search

Ova1-OVRM10112D02

Sequence:


               
               TACTCTTTGTCACTCTTACCTGTAAGCAATGTTACTGTTCACTACTATTTAATGAAATGA
AGCTTTGTCATTTGTGGACAGAAACAGATTTAGTTTTGTGGAATTTGGATGGAAATTACA
ACTGTAGACCGTTGGTTTTGAAATGCTAAATAATCAGTTGACCATTTTTTGGGCCACCAA
CATGGTTACTAATCAGGATGTTTTAAGTACTGATTTGAAGGGTGATTTGGGGATTTATCC
ATCTGCTTGCTTATTGGAATAGCCCCTTATCTGGAGCTATAAGAATAGCATTGAAACATG
GCTGTTCTCTGGTTCTGACCTCCTGACAAGAGGATAGGCGGATGGACTCTTTCTGTGGGA
TTCTGCCTGGGTACCTGTCATTCAGTTAACACAGCAGTGCTGCTTGCAGGTTAGGATTAC
TGTCTTTGCAAGGATGGAGACATCAAATGCATTTTGATTTTCATCATGCAGCCCGCTTTC
ATATTTTTCCAACTGGCTTTTCCCTTAATGCTACAGTGCATTTAAAAATAGAAACAGTTC
CTCTCTTGGGTTTTGGGTTGATTAATTGCAACAATGCTTCATGTTGTGTTTGCAATTCAT
TTCTATCATTTGTTTTGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACTCTTTGTCACTCTTACCTGTAAGCAATGTTACTGTTCACTACTATTTAATGAAATGA
AGCTTTGTCATTTGTGGACAGAAACAGATTTAGTTTTGTGGAATTTGGATGGAAATTACA
ACTGTAGACCGTTGGTTTTGAAATGCTAAATAATCAGTTGACCATTTTTTGGGCCACCAA
CATGGTTACTAATCAGGATGTTTTAAGTACTGATTTGAAGGGTGATTTGGGGATTTATCC
ATCTGCTTGCTTATTGGAATAGCCCCTTATCTGGAGCTATAAGAATAGCATTGAAACATG
GCTGTTCTCTGGTTCTGACCTCCTGACAAGAGGATAGGCGGATGGACTCTTTCTGTGGGA
TTCTGCCTGGGTACCTGTCATTCAGTTAACACAGCAGTGCTGCTTGCAGGTTAGGATTAC
TGTCTTTGCAAGGATGGAGACATCAAATGCATTTTGATTTTCATCATGCAGCCCGCTTTC
ATATTTTTCCAACTGGCTTTTCCCTTAATGCTACAGTGCATTTAAAAATAGAAACAGTTC
CTCTCTTGGGTTTTGGGTTGATTAATTGCAACAATGCTTCATGTTGTGTTTGCAATTCAT
TTCTATCATTTGTTTTGGA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               390-486, + strand, RNAz p=0.640261

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               390-486, + strand, RNAz p=0.640261

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               455-574, - strand, RNAmicro p=0.988187

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               455-574, - strand, RNAmicro p=0.988187

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-619, gnl|bosTau2|chr23 (31665375-31665999)
               

               
               7-619, gnl|Hg17|chr6 (18093705-18093069)
               

               
               7-619, gnl|Mm7|chr13 (46409615-46408979)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-619, gnl|bosTau2|chr23 (31665375-31665999)
               

               
               7-619, gnl|Hg17|chr6 (18093705-18093069)
               

               
               7-619, gnl|Mm7|chr13 (46409615-46408979)

	7-619, gnl\|bosTau2\|chr23 (31665375-31665999)
	7-619, gnl\|Hg17\|chr6 (18093705-18093069)
	7-619, gnl\|Mm7\|chr13 (46409615-46408979)