Non-Coding RNA Search

Ova1-OVRM10113F06

Sequence:


               
               TTTAATTTTCTTTTTTTGCCTCAGACCCAAAAGTCAGTAAATAATAAGTGTGGTCCCCAG
CCAATCTTTGCTTAGATAGCTCTCGACTGCTTCTTTCAGGCAGAGGCCCAAACTCTAGAA
CACAGCCAATTCCAGGGTGGGAGGGAAAGCAGTCCAGACAAAGGCAAGAGAATGATTGGT
CAATGACAGGGTTGAGGGAAAGTGTGTCTTGACACATTCCCATTATAAACATTGTCCCCA
TCCCAGAGTTACTAATATCCCTGGCATTGCCATACCAACATTCAGTTGGCATTCTGTTTT
CCACTGCCCTTTCCTGCTAAGCTGTCTAACTCAGCAAAGGTCTTCATCAGACAGGATCAG
TGCATATGACAAAACATGAAAAGAAATTTAAAATCCTTTAAGGAGCTATTTGTCTTTCTC
TAGTGAACTATCCATTAAAACTCAATAATAATCATCCTAGATATTAGCTATGACCTGAAA
TATAGCTTCGTATCATGTATTCTGAAAAGAAAAAAAAATTAACTTAATTCCTCTTTGTTG
TAGCTAATGGAATATTAACAGCTGAGAAGCCTTCTCCAGATCTCAGTATTGTGCTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAATTTTCTTTTTTTGCCTCAGACCCAAAAGTCAGTAAATAATAAGTGTGGTCCCCAG
CCAATCTTTGCTTAGATAGCTCTCGACTGCTTCTTTCAGGCAGAGGCCCAAACTCTAGAA
CACAGCCAATTCCAGGGTGGGAGGGAAAGCAGTCCAGACAAAGGCAAGAGAATGATTGGT
CAATGACAGGGTTGAGGGAAAGTGTGTCTTGACACATTCCCATTATAAACATTGTCCCCA
TCCCAGAGTTACTAATATCCCTGGCATTGCCATACCAACATTCAGTTGGCATTCTGTTTT
CCACTGCCCTTTCCTGCTAAGCTGTCTAACTCAGCAAAGGTCTTCATCAGACAGGATCAG
TGCATATGACAAAACATGAAAAGAAATTTAAAATCCTTTAAGGAGCTATTTGTCTTTCTC
TAGTGAACTATCCATTAAAACTCAATAATAATCATCCTAGATATTAGCTATGACCTGAAA
TATAGCTTCGTATCATGTATTCTGAAAAGAAAAAAAAATTAACTTAATTCCTCTTTGTTG
TAGCTAATGGAATATTAACAGCTGAGAAGCCTTCTCCAGATCTCAGTATTGTGCTTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               181-300, - strand, RNAz p=0.624373

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               181-300, - strand, RNAz p=0.624373

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-597, gnl|bosTau2|chr10 (29400755-29400164)
               

               
               1-597, gnl|Hg17|chr14 (50526445-50525852)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-597, gnl|bosTau2|chr10 (29400755-29400164)
               

               
               1-597, gnl|Hg17|chr14 (50526445-50525852)

	1-597, gnl\|bosTau2\|chr10 (29400755-29400164)
	1-597, gnl\|Hg17\|chr14 (50526445-50525852)