Non-Coding RNA Search

Ova1-OVRM10116H02

Sequence:


               
               CGTTCAATCTTTTTCTCTAGTAATTTTGTACATGACAAACTTTTTAGTCGGTGCATTAAT
AATCTATAAGTAATGAGTTGTCAGGTGTCAGTTAGATAAGATTAAAAGACTGTTTAAGCA
TTATCTCTTTGCTTCTTTGCATGCGTTTTATAGGTCCGGAGAAATAACTCTTTGAATTGT
GGTTGTACGCACATACTAGCTCTCCCTGCCTCCCTCTCTCTCTCTCTGTCTGTCTCTTTC
TCTCTCTCATTTGGCTCTGCTCCAGGTGTACCTGGAAGAACTGTATCATGTTACATAAAT
CCTGCATGTAGGAGCAGATTCGAAGCTCATGCTGTGTGAATCAAGGGGACCCATGTCTCA
GCTGTCCTCTGTAACCCGATTTTAGTTTTGAAAATGTTACTTTTGCTTCTCAAAGGAAAC
TTTGTCAGGGGAAACAGCCCTGGCAGAGAGGAACAGTGAAGCTGTAGGCTTGAGTTTCCT
AGCAAGTCAGGTTGAGGTCTATTCTTGTCAAATCTGTCTTAAGTGTGTTTACACAGAGTT
TGCCTTTCTGGTATTNTCTGCTTGCACAGACCTGATCTCCACCTATTTTGTGTCAACAGT
TGCTGGGGCTGGTGCTGGGTGATTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGTTCAATCTTTTTCTCTAGTAATTTTGTACATGACAAACTTTTTAGTCGGTGCATTAAT
AATCTATAAGTAATGAGTTGTCAGGTGTCAGTTAGATAAGATTAAAAGACTGTTTAAGCA
TTATCTCTTTGCTTCTTTGCATGCGTTTTATAGGTCCGGAGAAATAACTCTTTGAATTGT
GGTTGTACGCACATACTAGCTCTCCCTGCCTCCCTCTCTCTCTCTCTGTCTGTCTCTTTC
TCTCTCTCATTTGGCTCTGCTCCAGGTGTACCTGGAAGAACTGTATCATGTTACATAAAT
CCTGCATGTAGGAGCAGATTCGAAGCTCATGCTGTGTGAATCAAGGGGACCCATGTCTCA
GCTGTCCTCTGTAACCCGATTTTAGTTTTGAAAATGTTACTTTTGCTTCTCAAAGGAAAC
TTTGTCAGGGGAAACAGCCCTGGCAGAGAGGAACAGTGAAGCTGTAGGCTTGAGTTTCCT
AGCAAGTCAGGTTGAGGTCTATTCTTGTCAAATCTGTCTTAAGTGTGTTTACACAGAGTT
TGCCTTTCTGGTATTNTCTGCTTGCACAGACCTGATCTCCACCTATTTTGTGTCAACAGT
TGCTGGGGCTGGTGCTGGGTGATTAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               3-120, - strand, RNAz p=0.633838

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               3-120, - strand, RNAz p=0.633838

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-626, gnl|bosTau2|chr11 (46932122-46931483)
               

               
               3-626, gnl|Hg17|chr2 (66693844-66694480)
               

               
               3-626, gnl|Mm7|chr11 (18850710-18850136)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-626, gnl|bosTau2|chr11 (46932122-46931483)
               

               
               3-626, gnl|Hg17|chr2 (66693844-66694480)
               

               
               3-626, gnl|Mm7|chr11 (18850710-18850136)

	3-626, gnl\|bosTau2\|chr11 (46932122-46931483)
	3-626, gnl\|Hg17\|chr2 (66693844-66694480)
	3-626, gnl\|Mm7\|chr11 (18850710-18850136)