Non-Coding RNA Search

Ova1-OVRM10117C04

Sequence:


               
               Tgatccttaacccactgagcaagaccagggatcaaacacgggtcctcacggatactagtt
gggttcattactgctgagccacaatgggaactccCAGCCAGGCTTTTCTCGAGATTTCAC
TTTCCAAAAAACACTGGTGGTCTTTTCTTTTGCTAAATATAAAATCATATTGTCATGTTA
ATATACTTTTTCAAATTGCACATGCCCCTGCAACCAGCATGTGACACTTTCCTGAGCCAA
ATCACAGATTTTCTGAGCAGATTCTTTATGCCATGGCGACAGAAAAGTTTCCAGCAAACC
TTCTGGAAATAGAAAGACCAGGATTTGGGTGTGAATAAGAGGCTTTGCCAAGCCCTCTCC
ATCTGGCTGTCTCCTTCCTGAACTGCCCTGATGCCACTGCTGCTGCTGCCTTAGTAAAAG
AAAATTAAGATTTCCATGGCTGGAGACATTTAAGAGGCTAAGCTGTTAAAGAGAGGTTAG
CATCTACTGGAGGCTTCCTTCCTATTCAGTCAGAAGAAAAGAAATGGGAGAGTTTGAATG
AGGTAGCTATCTGGGATATTTAGTTACTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               Tgatccttaacccactgagcaagaccagggatcaaacacgggtcctcacggatactagtt
gggttcattactgctgagccacaatgggaactccCAGCCAGGCTTTTCTCGAGATTTCAC
TTTCCAAAAAACACTGGTGGTCTTTTCTTTTGCTAAATATAAAATCATATTGTCATGTTA
ATATACTTTTTCAAATTGCACATGCCCCTGCAACCAGCATGTGACACTTTCCTGAGCCAA
ATCACAGATTTTCTGAGCAGATTCTTTATGCCATGGCGACAGAAAAGTTTCCAGCAAACC
TTCTGGAAATAGAAAGACCAGGATTTGGGTGTGAATAAGAGGCTTTGCCAAGCCCTCTCC
ATCTGGCTGTCTCCTTCCTGAACTGCCCTGATGCCACTGCTGCTGCTGCCTTAGTAAAAG
AAAATTAAGATTTCCATGGCTGGAGACATTTAAGAGGCTAAGCTGTTAAAGAGAGGTTAG
CATCTACTGGAGGCTTCCTTCCTATTCAGTCAGAAGAAAAGAAATGGGAGAGTTTGAATG
AGGTAGCTATCTGGGATATTTAGTTACTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               353-459, - strand, RNAz p=0.726549

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               353-459, - strand, RNAz p=0.726549

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               118-569, gnl|bosTau2|chr22 (11961377-11961847)
               

               
               118-569, gnl|Hg17|chr3 (9840154-9840573)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               118-569, gnl|bosTau2|chr22 (11961377-11961847)
               

               
               118-569, gnl|Hg17|chr3 (9840154-9840573)

	118-569, gnl\|bosTau2\|chr22 (11961377-11961847)
	118-569, gnl\|Hg17\|chr3 (9840154-9840573)