Non-Coding RNA Search

Ova1-OVRM10118G03

Sequence:


               
               CAAACGCCCGGGTCTCTGGCGCCGGACGCCGCGGGGAGGGCAGCGAGGCCCCAGGTACCC
ATTACACCATTCTTTGGCGAAGGTTATTGGGCAGTTTTGACCTCTCCCAATCGAACACTC
TACAAATTACCATCTCTGGACTCCCAGCTGACACCCTGCCGGAGGCAAGAGCTACTAAGC
CAACTGGAACTGTGCCTTTTCTCTTGTCAAGGTTTTCTTCTTAACACAGGAAAAAGAAAG
AAAAAAAAACGATGAAGTTGGGCAAAGTGGAGTTCTGCCATTTTCTGCAGCTAGTGGCTC
TCTTCCTGTGTTTTTCTGGAATGAGTCAAGCAGAGCTCTCAAAGTCCGGATCAAAGCCCT
ATTTCCAATCAGGGAGATCCCGGACCAAGCGCAGCTGGGTGTGGAATCAGTTCTTTGTGC
TGGAGGAGTACATGGGTTCAGACCCCCTCTATGTAGGCAAGCTTCACTCTGATGTTGATA
AAGGAGATGGTTCCATCAAATACATCTTGTCAGGCGAAGGGGCAAGTTCCATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAACGCCCGGGTCTCTGGCGCCGGACGCCGCGGGGAGGGCAGCGAGGCCCCAGGTACCC
ATTACACCATTCTTTGGCGAAGGTTATTGGGCAGTTTTGACCTCTCCCAATCGAACACTC
TACAAATTACCATCTCTGGACTCCCAGCTGACACCCTGCCGGAGGCAAGAGCTACTAAGC
CAACTGGAACTGTGCCTTTTCTCTTGTCAAGGTTTTCTTCTTAACACAGGAAAAAGAAAG
AAAAAAAAACGATGAAGTTGGGCAAAGTGGAGTTCTGCCATTTTCTGCAGCTAGTGGCTC
TCTTCCTGTGTTTTTCTGGAATGAGTCAAGCAGAGCTCTCAAAGTCCGGATCAAAGCCCT
ATTTCCAATCAGGGAGATCCCGGACCAAGCGCAGCTGGGTGTGGAATCAGTTCTTTGTGC
TGGAGGAGTACATGGGTTCAGACCCCCTCTATGTAGGCAAGCTTCACTCTGATGTTGATA
AAGGAGATGGTTCCATCAAATACATCTTGTCAGGCGAAGGGGCAAGTTCCATTT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q8BLT5_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q8BLT5_MOUSE

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               132-330, no strand, RNAz p=0.774876

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               132-330, no strand, RNAz p=0.774876

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               53-461, gnl|bosTau2|chr24 (10465544-10465136)
               

               
               53-461, gnl|Hg17|chr18 (61580861-61581268)
               

               
               53-461, gnl|Mm7|chr1 (109892423-109892828)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               53-461, gnl|bosTau2|chr24 (10465544-10465136)
               

               
               53-461, gnl|Hg17|chr18 (61580861-61581268)
               

               
               53-461, gnl|Mm7|chr1 (109892423-109892828)

	53-461, gnl\|bosTau2\|chr24 (10465544-10465136)
	53-461, gnl\|Hg17\|chr18 (61580861-61581268)
	53-461, gnl\|Mm7\|chr1 (109892423-109892828)