Non-Coding RNA Search

Ova1-OVRM10120C02

Sequence:


               
               ACTTGACGGAGGCTGGGGTGGCGGAGAGCTGGGCAGTCACGCAGCCTAACTGGCTGGTCG
GGCGTCAGGGCGGTGAAGGTAGGACTACCGGTCCCGGGCGCCGAGTTCCCTCTCTCCAGC
TGCCCGCAGTCAGAGCATGCTCCTCAGGCCCCGAGGACCCCTGGCCGGGCTTGCTTAGAG
AAGACAACTCCCCAGCACTGGGGCCGGGGCGTCCCTGCCCGCTCCTCCACTGTCGCTGGA
GAACCGCCTGGCTGAGCGGCTGGGAGAAACAGGCCAGAGCCTTCTAGGGCCTCGGGCCCG
GGGACCCGTGGAGGATGAGCTGGCTCTTTCCCCTGACCAAGAGCGCCTCCTCCTCCGCAG
CTGGGTCCTCCGGTAGCCTCACCAGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTGACGGAGGCTGGGGTGGCGGAGAGCTGGGCAGTCACGCAGCCTAACTGGCTGGTCG
GGCGTCAGGGCGGTGAAGGTAGGACTACCGGTCCCGGGCGCCGAGTTCCCTCTCTCCAGC
TGCCCGCAGTCAGAGCATGCTCCTCAGGCCCCGAGGACCCCTGGCCGGGCTTGCTTAGAG
AAGACAACTCCCCAGCACTGGGGCCGGGGCGTCCCTGCCCGCTCCTCCACTGTCGCTGGA
GAACCGCCTGGCTGAGCGGCTGGGAGAAACAGGCCAGAGCCTTCTAGGGCCTCGGGCCCG
GGGACCCGTGGAGGATGAGCTGGCTCTTTCCCCTGACCAAGAGCGCCTCCTCCTCCGCAG
CTGGGTCCTCCGGTAGCCTCACCAGCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               266-387, - strand, RNAz p=0.957981

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               266-387, - strand, RNAz p=0.957981

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               307-393, + strand, RNAmicro p=0.927793

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               307-393, + strand, RNAmicro p=0.927793

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-387, gnl|bosTau2|chr27 (12686376-12685998)
               

               
               4-387, gnl|Hg17|chr8 (17148814-17149197)
               

               
               4-387, gnl|Mm7|chr8 (39302332-39302711)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-387, gnl|bosTau2|chr27 (12686376-12685998)
               

               
               4-387, gnl|Hg17|chr8 (17148814-17149197)
               

               
               4-387, gnl|Mm7|chr8 (39302332-39302711)

	4-387, gnl\|bosTau2\|chr27 (12686376-12685998)
	4-387, gnl\|Hg17\|chr8 (17148814-17149197)
	4-387, gnl\|Mm7\|chr8 (39302332-39302711)