Non-Coding RNA Search

Ova1-OVRM10122B05

Sequence:


               
               TTTGAGTCTGACAGTGAGGAGGACGAGGAAGCCCAGCCCGAGGACCCCCGGCCTTCTGCA
CAGAGCGCCTTCCAGATGGCATACCAAGCGTGGGTGACCAACGCGCAGACGGTGCTGAGG
CAGCAGCGGCAGGAGCAGGCCGGGCAGCTGCCCACTGGAGGCGACCCAGGCCAGGAGGCA
GAGCTGGCCGAGGGCCCGGAGGACGAGGTGGCAGGCCGCAGCCACGTGATGCAGCGAGTG
CTGAGCACCGCACAGTTCCTGTGGGTGCTGGGCCAGGCTCTAGTGGACGGGCTGACGCGC
TGGCTGCACACCTTCACGCGGCACCACAGCGCGATGAGCAACGTGCTGCGTGCGGAGCGC
TACCTGCTAACGCAGGAGCTGCTTCGGGGAGGGGAGGTGCGCCTGGACGTGCTGGACCAG
CTGTATGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGAGTCTGACAGTGAGGAGGACGAGGAAGCCCAGCCCGAGGACCCCCGGCCTTCTGCA
CAGAGCGCCTTCCAGATGGCATACCAAGCGTGGGTGACCAACGCGCAGACGGTGCTGAGG
CAGCAGCGGCAGGAGCAGGCCGGGCAGCTGCCCACTGGAGGCGACCCAGGCCAGGAGGCA
GAGCTGGCCGAGGGCCCGGAGGACGAGGTGGCAGGCCGCAGCCACGTGATGCAGCGAGTG
CTGAGCACCGCACAGTTCCTGTGGGTGCTGGGCCAGGCTCTAGTGGACGGGCTGACGCGC
TGGCTGCACACCTTCACGCGGCACCACAGCGCGATGAGCAACGTGCTGCGTGCGGAGCGC
TACCTGCTAACGCAGGAGCTGCTTCGGGGAGGGGAGGTGCGCCTGGACGTGCTGGACCAG
CTGTATGCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               299-403, - strand, RNAz p=0.846081

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               299-403, - strand, RNAz p=0.846081

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               211-403, gnl|bosTau2|chr18 (12638081-12638274)
               

               
               211-403, gnl|Hg17|chr16 (87316922-87316716)
               

               
               211-403, gnl|Mm7|chr8 (121130256-121130075)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               211-403, gnl|bosTau2|chr18 (12638081-12638274)
               

               
               211-403, gnl|Hg17|chr16 (87316922-87316716)
               

               
               211-403, gnl|Mm7|chr8 (121130256-121130075)

	211-403, gnl\|bosTau2\|chr18 (12638081-12638274)
	211-403, gnl\|Hg17\|chr16 (87316922-87316716)
	211-403, gnl\|Mm7\|chr8 (121130256-121130075)