Non-Coding RNA Search

Ova1-OVRM10124B12

Sequence:


               
               GATGTGCCTGGGCCGTCGTGTTGGCAGTCGGGGCTCTGAAGTCTAGGTGCTCAAGGTGTG
CCGGCGGACCAGGCGGATGGCGCAGGGTTGGGCCGGCTTCTCTGAGGAGGAGCTGAGGCG
ATTAAAGCAGACTAAAGATCCATTTGAACCACAGCGGCGCCTCCCTGTGAAGAAAAGTCG
ACAACAACTTCAGCGAGAAAAAGCCCTTCAAGAACAAAGCCAAAAACTTGGACTTCAAGA
TAGATCAACCTCATTACCTCCAGAGCAGCTGCTTTCTGCACCAAAACAAAGACTCAATAC
TCAAAGACCACATTCTTCTCCCCCTACTCCTCCTACAGTCACCCCTCCTCTTGGTGATAG
AAAACCACAGGGTAATGAAAGTCAACCAAGGGAATTAGGACTGGAGAATTGCCATGAAGG
TCACAAAAATGCTGAGGTTCTACCTCCAAAACCAGATTGCAAATTGGAAAAAAAGAAAGT
GGAATTGTTAGTAAGTCTATATATCCATGAAACTTCTTTCTGTTTTACCTATTTTCCCCC
ATTGGGCTTTGAAGAAATACAGTTTTAACATTTTCTTTGTTTTGTATTCTAACCTATAAA
GGTAATGAATAAACTATTGAAAAATAGCTAACACCTAAATATATTATAAGCAGTCAGTGT
GAAGCATTTTATATGTTTTGTTACTTAGTCTTCACAACAGCCTTGCCATGCACCTTCGTT
ATTTTTACTTTACAGCTATATCCTAGACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGTGCCTGGGCCGTCGTGTTGGCAGTCGGGGCTCTGAAGTCTAGGTGCTCAAGGTGTG
CCGGCGGACCAGGCGGATGGCGCAGGGTTGGGCCGGCTTCTCTGAGGAGGAGCTGAGGCG
ATTAAAGCAGACTAAAGATCCATTTGAACCACAGCGGCGCCTCCCTGTGAAGAAAAGTCG
ACAACAACTTCAGCGAGAAAAAGCCCTTCAAGAACAAAGCCAAAAACTTGGACTTCAAGA
TAGATCAACCTCATTACCTCCAGAGCAGCTGCTTTCTGCACCAAAACAAAGACTCAATAC
TCAAAGACCACATTCTTCTCCCCCTACTCCTCCTACAGTCACCCCTCCTCTTGGTGATAG
AAAACCACAGGGTAATGAAAGTCAACCAAGGGAATTAGGACTGGAGAATTGCCATGAAGG
TCACAAAAATGCTGAGGTTCTACCTCCAAAACCAGATTGCAAATTGGAAAAAAAGAAAGT
GGAATTGTTAGTAAGTCTATATATCCATGAAACTTCTTTCTGTTTTACCTATTTTCCCCC
ATTGGGCTTTGAAGAAATACAGTTTTAACATTTTCTTTGTTTTGTATTCTAACCTATAAA
GGTAATGAATAAACTATTGAAAAATAGCTAACACCTAAATATATTATAAGCAGTCAGTGT
GAAGCATTTTATATGTTTTGTTACTTAGTCTTCACAACAGCCTTGCCATGCACCTTCGTT
ATTTTTACTTTACAGCTATATCCTAGACT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|40787786|gb|AAH64945.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|40787786|gb|AAH64945.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               443-554, - strand, RNAz p=0.942056

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               443-554, - strand, RNAz p=0.942056

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               133-747, gnl|bosTau2|chr16 (26425630-26426246)
               

               
               133-747, gnl|Hg17|chr1 (167240004-167240644)
               

               
               133-747, gnl|Mm7|chr1 (163358179-163357649)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               133-747, gnl|bosTau2|chr16 (26425630-26426246)
               

               
               133-747, gnl|Hg17|chr1 (167240004-167240644)
               

               
               133-747, gnl|Mm7|chr1 (163358179-163357649)

	133-747, gnl\|bosTau2\|chr16 (26425630-26426246)
	133-747, gnl\|Hg17\|chr1 (167240004-167240644)
	133-747, gnl\|Mm7\|chr1 (163358179-163357649)