Non-Coding RNA Search

Ova1-OVRM10125D03

Sequence:


               
               TTTTAAGTATAATCTCCATTTTACTGTCTTTTGAGAGAATAGCATTTCTTCAGTTCTAAG
GACTCAGCTCCTTAAATGGGCTTTGGTGGAGGTCATGGGGCGGCACCTGCAGGTCTGATT
TGGGGTAGAggagttcccattatggcgcagcggaaatgaatctgactagaaaccacgagg
ttgagggttcgatccctggcctcactcagcgggtttaggatccatcgttgccgtgagctg
tggtgtagatcgcagatgcggctcagatctgatgttgctgtggctatgggatatgccggc
agctatagctctgattcgacccctagccccggaacctccgtgtgctgcaggtgcAGTCCT
AAAAGCAAAAAAATAAAAATAAATAGATAAATTGGGGTGAAGGTGTTCGATCCTTCTGGG
CTTTTGGAGAATGATTTCTGACTACATTGCTGTGAATGGCACAACTCACCCAGTAATATA
GTTTCACATACAGCTCGGGGAACACACAGGCATCGAAAACTCTTGCTTCAGAAATGTTCC
TGATGGCCACAGCCTCTGCTATGTTTCGAATGACAAACGCTCAATGGCCTTGTCCTTGGG
CATGCATTGGGCACAGTTGGTGTAGTGAATAGGCTGCACATGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTAAGTATAATCTCCATTTTACTGTCTTTTGAGAGAATAGCATTTCTTCAGTTCTAAG
GACTCAGCTCCTTAAATGGGCTTTGGTGGAGGTCATGGGGCGGCACCTGCAGGTCTGATT
TGGGGTAGAggagttcccattatggcgcagcggaaatgaatctgactagaaaccacgagg
ttgagggttcgatccctggcctcactcagcgggtttaggatccatcgttgccgtgagctg
tggtgtagatcgcagatgcggctcagatctgatgttgctgtggctatgggatatgccggc
agctatagctctgattcgacccctagccccggaacctccgtgtgctgcaggtgcAGTCCT
AAAAGCAAAAAAATAAAAATAAATAGATAAATTGGGGTGAAGGTGTTCGATCCTTCTGGG
CTTTTGGAGAATGATTTCTGACTACATTGCTGTGAATGGCACAACTCACCCAGTAATATA
GTTTCACATACAGCTCGGGGAACACACAGGCATCGAAAACTCTTGCTTCAGAAATGTTCC
TGATGGCCACAGCCTCTGCTATGTTTCGAATGACAAACGCTCAATGGCCTTGTCCTTGGG
CATGCATTGGGCACAGTTGGTGTAGTGAATAGGCTGCACATGGC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61814110|ref|XP_596567.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61814110|ref|XP_596567.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-131, gnl|bosTau2|chr14 (10066841-10066710)
               

               
               1-131, gnl|Hg17|chr4 (114492735-114492865)
               

               
               1-131, gnl|Mm7|chr6 (146725493-146725619)
               


               
               411-644, gnl|bosTau2|chr14 (10066709-10066478)
               

               
               411-644, gnl|Hg17|chr4 (114492866-114493107)
               

               
               411-644, gnl|Mm7|chr6 (146725620-146725861)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-131, gnl|bosTau2|chr14 (10066841-10066710)
               

               
               1-131, gnl|Hg17|chr4 (114492735-114492865)
               

               
               1-131, gnl|Mm7|chr6 (146725493-146725619)
               


               
               411-644, gnl|bosTau2|chr14 (10066709-10066478)
               

               
               411-644, gnl|Hg17|chr4 (114492866-114493107)
               

               
               411-644, gnl|Mm7|chr6 (146725620-146725861)

	1-131, gnl\|bosTau2\|chr14 (10066841-10066710)
	1-131, gnl\|Hg17\|chr4 (114492735-114492865)
	1-131, gnl\|Mm7\|chr6 (146725493-146725619)

	411-644, gnl\|bosTau2\|chr14 (10066709-10066478)
	411-644, gnl\|Hg17\|chr4 (114492866-114493107)
	411-644, gnl\|Mm7\|chr6 (146725620-146725861)