Non-Coding RNA Search

Ova1-OVRM10126B10

Sequence:


               
               TGCATATTAAGGACAGAAGATAATGTACCCTTTTGGTTGGCATAGGTATACGGACAGTGA
ATGTGAAGAAAACAAAAAATCTTTTATGTTGTTCATCGTTCTGAGGAAAAGGTAGACATG
GAAACCAGTAAAGAAGTGTGTACAGAGAATGCTGGGAAGCAGGTGATGTCTCAGAGCAGG
GACAACGTCAGAGGAAGGAAGAGGGGTGTGAGTTGAGTCTTGACAAAGTTTCCAGGAGAG
ACAAGTCATGTTAAGGGCAGCCAGTTCCTATGCAAAATCATTACTTCTGCTTCCTTTATT
TATGATTCCTTCCTGCCAGGTGTACCTGTCTCCCCGTGATCATGGCCTTGGCCCCTCACT
CAGGTCTTCTTTCTTCCATGACTATTCAGACAGATCCAGTGAAAGTTTGAAAATGTGAAG
TGGTTGGGGCTTTATGGAATGAGAACTTTTGATCGTCCATTGTGTGCCTTCTTTTTCCAT
AAAGTGCAGCTAAATTTGACGTATAAATTTTCAAAGTATTGGCAGTAAAATGACAGCTAT
TCACTTAAGATTTGAATACAGTTAAAAATAATAAATAGTTGGCAGAAATATAGAGTATAT
TAAAATTTGGAAATGAATTTCCACTCCATGATATAGTACCACTTTATATTTGAGGCCAAG
TGATCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCATATTAAGGACAGAAGATAATGTACCCTTTTGGTTGGCATAGGTATACGGACAGTGA
ATGTGAAGAAAACAAAAAATCTTTTATGTTGTTCATCGTTCTGAGGAAAAGGTAGACATG
GAAACCAGTAAAGAAGTGTGTACAGAGAATGCTGGGAAGCAGGTGATGTCTCAGAGCAGG
GACAACGTCAGAGGAAGGAAGAGGGGTGTGAGTTGAGTCTTGACAAAGTTTCCAGGAGAG
ACAAGTCATGTTAAGGGCAGCCAGTTCCTATGCAAAATCATTACTTCTGCTTCCTTTATT
TATGATTCCTTCCTGCCAGGTGTACCTGTCTCCCCGTGATCATGGCCTTGGCCCCTCACT
CAGGTCTTCTTTCTTCCATGACTATTCAGACAGATCCAGTGAAAGTTTGAAAATGTGAAG
TGGTTGGGGCTTTATGGAATGAGAACTTTTGATCGTCCATTGTGTGCCTTCTTTTTCCAT
AAAGTGCAGCTAAATTTGACGTATAAATTTTCAAAGTATTGGCAGTAAAATGACAGCTAT
TCACTTAAGATTTGAATACAGTTAAAAATAATAAATAGTTGGCAGAAATATAGAGTATAT
TAAAATTTGGAAATGAATTTCCACTCCATGATATAGTACCACTTTATATTTGAGGCCAAG
TGATCAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               555-667, - strand, RNAz p=0.507479

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               555-667, - strand, RNAz p=0.507479

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               130-667, gnl|bosTau2|chr24 (25773750-25773212)
               

               
               130-667, gnl|Hg17|chr18 (429160-428289)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               130-667, gnl|bosTau2|chr24 (25773750-25773212)
               

               
               130-667, gnl|Hg17|chr18 (429160-428289)

	130-667, gnl\|bosTau2\|chr24 (25773750-25773212)
	130-667, gnl\|Hg17\|chr18 (429160-428289)