Non-Coding RNA Search

Ova1-OVRM10130A12

Sequence:


               
               TACACTCTTAAACGTACTGAATCCCAGCCCACCCCCTGACTTGGGTGCACACATTTAGAT
TCCGAGGCCGAAGGCAGTTCCCGGAATAGCATAGTCAAGGCTCCCAGAATCCTAAAAGGT
CACACTCCTTTTATTCTTGCCTCTTTTCACTTCTTTTCTGTTCGTATTGATTTCTTTGGG
CACATAAGAAAAAATACAGTGGGCAAAGCCTGCTACTTCCACTGAAATAAAATACTCTGC
AGTCAAACCACACACCATAAAGAAATAATTGCAGTCTGTATATATTGCTAATGGACATCT
CTCAGCAATTCTCTGTCTCATAAGCTTTAAACACAGACATTAGTATAAATATGCAGAAAT
CCCCATTCGGGCAAATTACTCTGCATTCCTGAACAGAAGGAAGATTAAGCATGTGCTGAT
ATCTTTGAAGGAGCTCAGCCGAGCAGGAAAAATTCACTAGCCCTCTCTGGCAGGGAGCTT
GGGACTCTGAGAGGCCTTCAGGACAGAGCTGCAGGCCTGGCTGGCATCTCCTCTTCCCCT
GAGCCCGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACACTCTTAAACGTACTGAATCCCAGCCCACCCCCTGACTTGGGTGCACACATTTAGAT
TCCGAGGCCGAAGGCAGTTCCCGGAATAGCATAGTCAAGGCTCCCAGAATCCTAAAAGGT
CACACTCCTTTTATTCTTGCCTCTTTTCACTTCTTTTCTGTTCGTATTGATTTCTTTGGG
CACATAAGAAAAAATACAGTGGGCAAAGCCTGCTACTTCCACTGAAATAAAATACTCTGC
AGTCAAACCACACACCATAAAGAAATAATTGCAGTCTGTATATATTGCTAATGGACATCT
CTCAGCAATTCTCTGTCTCATAAGCTTTAAACACAGACATTAGTATAAATATGCAGAAAT
CCCCATTCGGGCAAATTACTCTGCATTCCTGAACAGAAGGAAGATTAAGCATGTGCTGAT
ATCTTTGAAGGAGCTCAGCCGAGCAGGAAAAATTCACTAGCCCTCTCTGGCAGGGAGCTT
GGGACTCTGAGAGGCCTTCAGGACAGAGCTGCAGGCCTGGCTGGCATCTCCTCTTCCCCT
GAGCCCGGGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               240-435, - strand, RNAz p=0.947372

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               240-435, - strand, RNAz p=0.947372

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-538, gnl|bosTau2|chr11 (56009357-56009888)
               

               
               6-538, gnl|Hg17|chr2 (23791743-23792249)
               

               
               6-538, gnl|Mm7|chr12 (5066364-5065765)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-538, gnl|bosTau2|chr11 (56009357-56009888)
               

               
               6-538, gnl|Hg17|chr2 (23791743-23792249)
               

               
               6-538, gnl|Mm7|chr12 (5066364-5065765)

	6-538, gnl\|bosTau2\|chr11 (56009357-56009888)
	6-538, gnl\|Hg17\|chr2 (23791743-23792249)
	6-538, gnl\|Mm7\|chr12 (5066364-5065765)