Non-Coding RNA Search

Ova1-OVRM10131B06

Sequence:


               
               GGAGATTAACTGATGGCATGAATACATAAAAACCAAGATAGTCAATGATATGTGGCCTCA
TGCTGGTTGCAAATTTACTTAATAGTCAAGAAAATTGAAAAAAAAAAAAAACACCAAACA
CAGTGTTGTTTTCTTCCTGTTCTCTGCCCTAGGCGATGTGGCAGGAATCGGCTGGGAGAG
AACCGAGGGGACGCCGCCGCCTCCGGGGCAGCCAGCCAAGGGCCGAGTATACTTCACATA
CTGCGGGCAGCGCCTCTCACCATATCTCAAAGACGTCTCTGGTGGGATGTGGCCTGTGGT
TCACATTCAGAAAAAGGTAGGTTATCTTACTGCGAAAGGAAACCAAATTCTCTTCAGTAA
TTTGTTCCATAAGGAACAGAAAAAATTAAGGCACCAGACATGGCCTTGTTGACATAATAT
ATGGTACTTGGTAAGAGAAGGAACCACCAACTGGAAGGAGTGTGTCCTTCCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGATTAACTGATGGCATGAATACATAAAAACCAAGATAGTCAATGATATGTGGCCTCA
TGCTGGTTGCAAATTTACTTAATAGTCAAGAAAATTGAAAAAAAAAAAAAACACCAAACA
CAGTGTTGTTTTCTTCCTGTTCTCTGCCCTAGGCGATGTGGCAGGAATCGGCTGGGAGAG
AACCGAGGGGACGCCGCCGCCTCCGGGGCAGCCAGCCAAGGGCCGAGTATACTTCACATA
CTGCGGGCAGCGCCTCTCACCATATCTCAAAGACGTCTCTGGTGGGATGTGGCCTGTGGT
TCACATTCAGAAAAAGGTAGGTTATCTTACTGCGAAAGGAAACCAAATTCTCTTCAGTAA
TTTGTTCCATAAGGAACAGAAAAAATTAAGGCACCAGACATGGCCTTGTTGACATAATAT
ATGGTACTTGGTAAGAGAAGGAACCACCAACTGGAAGGAGTGTGTCCTTCCTT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               82-201, + strand, RNAz p=0.689168

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               82-201, + strand, RNAz p=0.689168

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-473, gnl|bosTau2|chr17 (37026068-37025625)
               

               
               7-473, gnl|Hg17|chr12 (111113286-111112848)
               

               
               7-473, gnl|Mm7|chr5 (120563367-120563763)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-473, gnl|bosTau2|chr17 (37026068-37025625)
               

               
               7-473, gnl|Hg17|chr12 (111113286-111112848)
               

               
               7-473, gnl|Mm7|chr5 (120563367-120563763)

	7-473, gnl\|bosTau2\|chr17 (37026068-37025625)
	7-473, gnl\|Hg17\|chr12 (111113286-111112848)
	7-473, gnl\|Mm7\|chr5 (120563367-120563763)