Non-Coding RNA Search

Ova1-OVRM10131G08

Sequence:


               
               ATTTAAAAAATCTGGTCAGTAATCACATCTCTAGTGCATTAAATGTAAAACAAAGTCTCC
TTAAAAGCCAGATGATGTTACATATAAAAACAATATAAGTGAATGGTCAGGACGGAAAAA
AGGAAACACAATAGAAAACATTTCTGAGTAACTTTTGTAACAATGTGAATCCGTGTAGCT
GAGGCATATAAATTGACACTAGCTCTTTTGAACTCCTGAGATTGCACTGGTATCAATTCA
TCGGATGCTGACAACTTTCTCCTTTCAGCTGATTGATTTTGAATTTTTCAAACTGATTAA
TGTTTTCATTTGAATGGTAATGCTGACTTTGCAGAAGATGTGATCTTTTAATTAGCAGAT
GCTGAGATTAGCATTAGGCTGAACAGTAATTAGCATTTGTTCTTATAGTACAAGAGACAA
ACTGAGTGCTGAAGCAGATAGAGCCTCTGTGTCTTCTTTCCATTGCCTCTAGATCTTCTT
TATGAGAGAGGTTAATAATTATTGAAATGCGTAATCACTGTGGTATTAAAAACATTTTAA
NCAATTGAGGATTCATTTCAGATAAAACATTTTCAGTTCCTTTAGATGTTCTGTGTGTAT
CTAGGACTCTGTTTTCAGGATTTACCTAAAAATTTTATAGTNGAACTTGAGCATTACTTT
GTGAAAGTGTAAGTTCTTACTTATGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTAAAAAATCTGGTCAGTAATCACATCTCTAGTGCATTAAATGTAAAACAAAGTCTCC
TTAAAAGCCAGATGATGTTACATATAAAAACAATATAAGTGAATGGTCAGGACGGAAAAA
AGGAAACACAATAGAAAACATTTCTGAGTAACTTTTGTAACAATGTGAATCCGTGTAGCT
GAGGCATATAAATTGACACTAGCTCTTTTGAACTCCTGAGATTGCACTGGTATCAATTCA
TCGGATGCTGACAACTTTCTCCTTTCAGCTGATTGATTTTGAATTTTTCAAACTGATTAA
TGTTTTCATTTGAATGGTAATGCTGACTTTGCAGAAGATGTGATCTTTTAATTAGCAGAT
GCTGAGATTAGCATTAGGCTGAACAGTAATTAGCATTTGTTCTTATAGTACAAGAGACAA
ACTGAGTGCTGAAGCAGATAGAGCCTCTGTGTCTTCTTTCCATTGCCTCTAGATCTTCTT
TATGAGAGAGGTTAATAATTATTGAAATGCGTAATCACTGTGGTATTAAAAACATTTTAA
NCAATTGAGGATTCATTTCAGATAAAACATTTTCAGTTCCTTTAGATGTTCTGTGTGTAT
CTAGGACTCTGTTTTCAGGATTTACCTAAAAATTTTATAGTNGAACTTGAGCATTACTTT
GTGAAAGTGTAAGTTCTTACTTATGTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               264-382, + strand, RNAz p=0.53627

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               264-382, + strand, RNAz p=0.53627

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-615, gnl|bosTau2|chr6 (42415624-42416248)
               

               
               1-615, gnl|Hg17|chr4 (61932230-61932850)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-615, gnl|bosTau2|chr6 (42415624-42416248)
               

               
               1-615, gnl|Hg17|chr4 (61932230-61932850)

	1-615, gnl\|bosTau2\|chr6 (42415624-42416248)
	1-615, gnl\|Hg17\|chr4 (61932230-61932850)