Non-Coding RNA Search

Ova1-OVRM10131H05

Sequence:


               
               AAGTGGGTCGGCGCCGGGGCGAGCGCGCCCGGAGTGGAGCTCGGCGGCCGGGATCCAGCG
GGGAGCCCTCGGTTCCCGACCATGCACCCCTCGGGCACGCCCCTCCAGAAGCCGTTATCT
AAGACAATCTAGTTTTCCTTTGTAAATCCCTCAAGACACTTATGAAGTTTCTTGTTCTGA
AATTGCTGTACTGCAATGAAGAAAAGGAGAAAGGTTACTTCACATCTTGAGAAGATCCAT
CTAGGCTATCATAAAGATTCTTCAGATGGAAATGTGGCAGCGGAGTGTGAGCAAATAACC
TGTACTCATTCCACAGAAAGACCAGCTCCTGACACTCTTCGCTGTTATCAGGAACTTCCT
CCCTCTCCGGATCAGAGAACACTTTTGAGTTCTTTGCAGTATAATAAGAATTTGCTGAAG
TATTTAAATGACGATAGGCAGAAGCAGCCGTCTTTCTGCGACTTGCTTATCATAGTAGAA
GGAAAAGAATTAGTGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGTGGGTCGGCGCCGGGGCGAGCGCGCCCGGAGTGGAGCTCGGCGGCCGGGATCCAGCG
GGGAGCCCTCGGTTCCCGACCATGCACCCCTCGGGCACGCCCCTCCAGAAGCCGTTATCT
AAGACAATCTAGTTTTCCTTTGTAAATCCCTCAAGACACTTATGAAGTTTCTTGTTCTGA
AATTGCTGTACTGCAATGAAGAAAAGGAGAAAGGTTACTTCACATCTTGAGAAGATCCAT
CTAGGCTATCATAAAGATTCTTCAGATGGAAATGTGGCAGCGGAGTGTGAGCAAATAACC
TGTACTCATTCCACAGAAAGACCAGCTCCTGACACTCTTCGCTGTTATCAGGAACTTCCT
CCCTCTCCGGATCAGAGAACACTTTTGAGTTCTTTGCAGTATAATAAGAATTTGCTGAAG
TATTTAAATGACGATAGGCAGAAGCAGCCGTCTTTCTGCGACTTGCTTATCATAGTAGAA
GGAAAAGAATTAGTGCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               308-427, - strand, RNAz p=0.618204

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               308-427, - strand, RNAz p=0.618204

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               269-497, gnl|bosTau2|chr18 (26857788-26858017)
               

               
               269-497, gnl|Hg17|chr1 (193901187-193900958)
               

               
               269-497, gnl|Mm7|chr1 (139306233-139306461)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               269-497, gnl|bosTau2|chr18 (26857788-26858017)
               

               
               269-497, gnl|Hg17|chr1 (193901187-193900958)
               

               
               269-497, gnl|Mm7|chr1 (139306233-139306461)

	269-497, gnl\|bosTau2\|chr18 (26857788-26858017)
	269-497, gnl\|Hg17\|chr1 (193901187-193900958)
	269-497, gnl\|Mm7\|chr1 (139306233-139306461)