Non-Coding RNA Search

Ova1-OVRM10132D09

Sequence:


               
               TTTAGAAATTGAATACCAGGAATTCCCTTCGTTAAAGCAGTTCAGGGGGTCAGGGTTGCA
GAAAATCTGACCTATTTATTCTCTTGCTTTCAGACAAAAGTCACAGCTGAAGCATGGCAG
ATAAATATCTATTCAATTTGCCAAACTCCTCAGGGACCGTTTAAGGTTTCCCTCGGAGAG
TCTCCTTCCTTGTCAATGAATTTCTCATAAATATTAGATAAATTCTTCTTGCTACAGTTT
AAGGCTGCTTTTCTTCTGCGGGAGTTAGTAACGACGCTGAACAGCTGGTCAGCATCCCCC
CGCCCCCGCCGCAGCAGTGCACATGGGCCCCGCCTTTCGGCTTTTCTCTGGACGGTCCTG
TGTTCGTTCCTGAGGCATTTCCTCGGGGATTCATACATCAGTCTTTCGGGCAGACCCTGG
TGGGACTAGTTTGCGCCCAAACCACCCTTCTGTCATGTCACGTTGCTTTCCTTCACTTCA
ACCGGTGTTTATTAAATGCTGCTGCAAGCTCCAAAGTTGCGGGTCTTACTGGACAGCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAGAAATTGAATACCAGGAATTCCCTTCGTTAAAGCAGTTCAGGGGGTCAGGGTTGCA
GAAAATCTGACCTATTTATTCTCTTGCTTTCAGACAAAAGTCACAGCTGAAGCATGGCAG
ATAAATATCTATTCAATTTGCCAAACTCCTCAGGGACCGTTTAAGGTTTCCCTCGGAGAG
TCTCCTTCCTTGTCAATGAATTTCTCATAAATATTAGATAAATTCTTCTTGCTACAGTTT
AAGGCTGCTTTTCTTCTGCGGGAGTTAGTAACGACGCTGAACAGCTGGTCAGCATCCCCC
CGCCCCCGCCGCAGCAGTGCACATGGGCCCCGCCTTTCGGCTTTTCTCTGGACGGTCCTG
TGTTCGTTCCTGAGGCATTTCCTCGGGGATTCATACATCAGTCTTTCGGGCAGACCCTGG
TGGGACTAGTTTGCGCCCAAACCACCCTTCTGTCATGTCACGTTGCTTTCCTTCACTTCA
ACCGGTGTTTATTAAATGCTGCTGCAAGCTCCAAAGTTGCGGGTCTTACTGGACAGCGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               76-190, - strand, RNAz p=0.997697

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               76-190, - strand, RNAz p=0.997697

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-533, gnl|bosTau2|chr9 (54051003-54050467)
               

               
               1-533, gnl|Hg17|chr6 (155536183-155536735)
               

               
               1-533, gnl|Mm7|chr17 (3409954-3410491)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-533, gnl|bosTau2|chr9 (54051003-54050467)
               

               
               1-533, gnl|Hg17|chr6 (155536183-155536735)
               

               
               1-533, gnl|Mm7|chr17 (3409954-3410491)

	1-533, gnl\|bosTau2\|chr9 (54051003-54050467)
	1-533, gnl\|Hg17\|chr6 (155536183-155536735)
	1-533, gnl\|Mm7\|chr17 (3409954-3410491)