Ova1-OVRM10135B12
|
ATTTTTTGGGCGCTTCGCTGATGGTGTCGGTGAGCGCGTTTCCCGCCTGAGCGCAACTAG
CGGCGAGTCGCGGGCACCTCCAGGAGAGCTTCTGTTTCATGTCCACCATCCCGCTTTATT
CTTGCTGATCTGCTAATGCAGTAAATTGGAAGACAGCTGTTGCCAGGATAACCTGTAATG
GGCAAGGAGCCACAGAGAAGAAAACATTTCTTTTAATTTTTAACCTTGGTTTGAAAGACC
AGCATGTTTTGGAAATTTGATCTTCACTCATCATCCCACATAGACACACTTCTAGAAAGA
GAAGATGTTACACTGAAGGAGCTGATGGATGAGGAAGACGTTTTACAGGAGTGTAAAGCT
CAGAACCGCAAACTTATAGAGTTTCTGTTAAAAGCAGAATGTCTCGAAGATTTAGTCTCA
TTCATTATAGAAGAACCACCTCAAGACATGGATGAAAAGATCCGATACAAGTACCCAAAT
ATATCTTGTGAGTTGCTCACTTCCGATGTCTCCCAAATGAATGATAGACTGGGAGAAGAC
GAGTCCTTGCTAATGAAATTGTATAGCTTCCTCCTAAACGATCCCCCCTTGAACCCACTA
CTTGCCAGTTTCTTCAGCAAGGTGCTAAGTATTCTTATCAGCAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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ATTTTTTGGGCGCTTCGCTGATGGTGTCGGTGAGCGCGTTTCCCGCCTGAGCGCAACTAG
CGGCGAGTCGCGGGCACCTCCAGGAGAGCTTCTGTTTCATGTCCACCATCCCGCTTTATT
CTTGCTGATCTGCTAATGCAGTAAATTGGAAGACAGCTGTTGCCAGGATAACCTGTAATG
GGCAAGGAGCCACAGAGAAGAAAACATTTCTTTTAATTTTTAACCTTGGTTTGAAAGACC
AGCATGTTTTGGAAATTTGATCTTCACTCATCATCCCACATAGACACACTTCTAGAAAGA
GAAGATGTTACACTGAAGGAGCTGATGGATGAGGAAGACGTTTTACAGGAGTGTAAAGCT
CAGAACCGCAAACTTATAGAGTTTCTGTTAAAAGCAGAATGTCTCGAAGATTTAGTCTCA
TTCATTATAGAAGAACCACCTCAAGACATGGATGAAAAGATCCGATACAAGTACCCAAAT
ATATCTTGTGAGTTGCTCACTTCCGATGTCTCCCAAATGAATGATAGACTGGGAGAAGAC
GAGTCCTTGCTAATGAAATTGTATAGCTTCCTCCTAAACGATCCCCCCTTGAACCCACTA
CTTGCCAGTTTCTTCAGCAAGGTGCTAAGTATTCTTATCAGCAG
|
|
gi|28076987|ref|NP_082081.1| |
Protein identifier
|
gi|28076987|ref|NP_082081.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
236-480, gnl|bosTau2|chr29 (42067413-42067169) |
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236-480, gnl|canFam2|chr18 (52390843-52390672) |
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236-480, gnl|danRer3|chr7 (4028822-4028654) |
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236-480, gnl|dasNov1|scaffold_186095 (906-750) |
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236-480, gnl|echTel1|scaffold_155182 (4312-4138) |
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236-480, gnl|fr1|chrUn (254935087-254934918) |
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236-480, gnl|galGal2|chr5 (13869018-13869186) |
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236-480, gnl|hg17|chr11 (68061684-68061855) |
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236-480, gnl|Hg17|chr11 (68061701-68061945) |
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236-480, gnl|mm7|chr19 (3421761-3421590) |
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236-480, gnl|Mm7|chr19 (3421742-3421498) |
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236-480, gnl|monDom2|scaffold_226 (101895-101726) |
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236-480, gnl|oryCun1|scaffold_209688 (51175-51004) |
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236-480, gnl|panTro1|chr9 (69109144-69109315) |
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236-480, gnl|rheMac2|chr14 (6189877-6189706) |
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236-480, gnl|rn3|chr1 (206200814-206200643) |
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236-480, gnl|tetNig1|chrUn_random (17983567-17983736) |
|
236-480, gnl|xenTro1|scaffold_1442 (63418-63596) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
236-480, gnl|bosTau2|chr29 (42067413-42067169) |
|
236-480, gnl|canFam2|chr18 (52390843-52390672) |
|
236-480, gnl|danRer3|chr7 (4028822-4028654) |
|
236-480, gnl|dasNov1|scaffold_186095 (906-750) |
|
236-480, gnl|echTel1|scaffold_155182 (4312-4138) |
|
236-480, gnl|fr1|chrUn (254935087-254934918) |
|
236-480, gnl|galGal2|chr5 (13869018-13869186) |
|
236-480, gnl|hg17|chr11 (68061684-68061855) |
|
236-480, gnl|Hg17|chr11 (68061701-68061945) |
|
236-480, gnl|mm7|chr19 (3421761-3421590) |
|
236-480, gnl|Mm7|chr19 (3421742-3421498) |
|
236-480, gnl|monDom2|scaffold_226 (101895-101726) |
|
236-480, gnl|oryCun1|scaffold_209688 (51175-51004) |
|
236-480, gnl|panTro1|chr9 (69109144-69109315) |
|
236-480, gnl|rheMac2|chr14 (6189877-6189706) |
|
236-480, gnl|rn3|chr1 (206200814-206200643) |
|
236-480, gnl|tetNig1|chrUn_random (17983567-17983736) |
|
236-480, gnl|xenTro1|scaffold_1442 (63418-63596) |
