Non-Coding RNA Search

Ova1-OVRM10148A07

Sequence:


               
               TTGGTCCAACGAACACTTCTAATTAGCTCTATATTTGCTTAGCAAAAAGTTTTACAAATT
CCAATTGTGAAAAGCAGCTATTTTGAGCTGGTAAGCATGTTGCAGCCTCAGCTATGATTT
TTCTATAGTTCTCAGCCCTTGAAGGCACAATTTAATTTTTCATGTATGCATACTAGCAAC
GGTAAACACTTGCGAGTGTAAAGAACCTTCTTTAATTAGCTGCACAACAATTAAAGGATT
CACAAACTAAATTGAACCCTGTCTCGGTGCTTACTAGCTGAATTCTACCACCTGTCACAA
CAGCACTTTGTTCAATCTGTTATGCAAAATCATTATAGCAATATAGCAGAGGGGGAAAAA
AAAGAGAAAACAGCAATTATTTCTTACTTTTCTCTTGAATGGGTTATTTTGGGTTATACT
GATGTCAGGTTCATTGAAGCTAACCTTTTGAAATCTGTAACAGCATAATACTTCTAAGGC
AGCCTCAGAATGGCTAGAAGACTATTTTGTTGTATTCGTTTAGGAGGCAGCAGTGCTCAT
CCTTAAAGCATGTGGGGACTCTGATCATTTGAAACAACCTGTTCTAACTCTCAGCCACCT
TCTCTTTTCCCCTTTCTCGCGAGGAACCCTCAACAGGCTCCTGTGTTACAGACGCATGCA
AACCACTGCAGATGTGAGTTTAAGGATGCCTTCCCCACCCTGCCTTTTCTGAAAGCCTCC
CCACTCTCATCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGGTCCAACGAACACTTCTAATTAGCTCTATATTTGCTTAGCAAAAAGTTTTACAAATT
CCAATTGTGAAAAGCAGCTATTTTGAGCTGGTAAGCATGTTGCAGCCTCAGCTATGATTT
TTCTATAGTTCTCAGCCCTTGAAGGCACAATTTAATTTTTCATGTATGCATACTAGCAAC
GGTAAACACTTGCGAGTGTAAAGAACCTTCTTTAATTAGCTGCACAACAATTAAAGGATT
CACAAACTAAATTGAACCCTGTCTCGGTGCTTACTAGCTGAATTCTACCACCTGTCACAA
CAGCACTTTGTTCAATCTGTTATGCAAAATCATTATAGCAATATAGCAGAGGGGGAAAAA
AAAGAGAAAACAGCAATTATTTCTTACTTTTCTCTTGAATGGGTTATTTTGGGTTATACT
GATGTCAGGTTCATTGAAGCTAACCTTTTGAAATCTGTAACAGCATAATACTTCTAAGGC
AGCCTCAGAATGGCTAGAAGACTATTTTGTTGTATTCGTTTAGGAGGCAGCAGTGCTCAT
CCTTAAAGCATGTGGGGACTCTGATCATTTGAAACAACCTGTTCTAACTCTCAGCCACCT
TCTCTTTTCCCCTTTCTCGCGAGGAACCCTCAACAGGCTCCTGTGTTACAGACGCATGCA
AACCACTGCAGATGTGAGTTTAAGGATGCCTTCCCCACCCTGCCTTTTCTGAAAGCCTCC
CCACTCTCATCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               280-399, - strand, RNAz p=0.550031

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               280-399, - strand, RNAz p=0.550031

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-731, gnl|bosTau2|chr18 (34211786-34212509)
               

               
               1-731, gnl|Hg17|chr19 (35584723-35585469)
               

               
               1-731, gnl|Mm7|chr7 (34491933-34491182)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-731, gnl|bosTau2|chr18 (34211786-34212509)
               

               
               1-731, gnl|Hg17|chr19 (35584723-35585469)
               

               
               1-731, gnl|Mm7|chr7 (34491933-34491182)

	1-731, gnl\|bosTau2\|chr18 (34211786-34212509)
	1-731, gnl\|Hg17\|chr19 (35584723-35585469)
	1-731, gnl\|Mm7\|chr7 (34491933-34491182)