Ova1-OVRM10148B04
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAAATTATATCCCAGAGGTGGAGTTCTGACAGTCATTCATTTGCTCAACAGCACGAATA TGATAATTATGCAAACTTACAGGAAATTAAAATTGGAGGCCAGTGCTTGGAGGACAACGT ACAAGTGACCAAAGTGGGTTTAACAGAGGAACTTGTTCTAGGCATGAGGAAGGCTTCCTG AACAGAGATCTTGAAGGCAAGTGGGTGTTGCCTAGGTGAAGGGGATGGGCGGAAATAGCA CTGTGTACCACCCAAAGCAGCTACAGCCAAAAGGAAGACAGTTAGACTGACTTCGTTAGG CTCACAATCATGTGACCTTGTGTAATAAGCGTGATGAGTTTTATATCATTCATGATCCTG GTGACCATACTTCTTGACCGCTGGGTGCTCTTCACTGAGCATTGTCCTACCCCCGCGCTA GACTTTCTGAAAGCTAGCTGGCCTCTTTTGGAAGCCTCACTGTCCAGCCTCAGCTGGAAA TTTTCTTCATTCTCAAGGGTATGAGCTCATCCCCACACCAGATGGGTTCCTGATAAATGA TGATTGTGCAGTCTCATTATTTTCATGTCATACTCACTCCCTTTGGAAAATAGAAACAGG GCCTGAGGTCTCTTTACCATCTTTCCAAGTGGGAGGAGAATTTCCTCATCGTGGTCACAC ACCCTGCCTTTTGAGAAAAATGCACAGTGTGGAACTAGGTGGCAGTGCTGCCCAAAGGGT C |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAAATTATATCCCAGAGGTGGAGTTCTGACAGTCATTCATTTGCTCAACAGCACGAATA TGATAATTATGCAAACTTACAGGAAATTAAAATTGGAGGCCAGTGCTTGGAGGACAACGT ACAAGTGACCAAAGTGGGTTTAACAGAGGAACTTGTTCTAGGCATGAGGAAGGCTTCCTG AACAGAGATCTTGAAGGCAAGTGGGTGTTGCCTAGGTGAAGGGGATGGGCGGAAATAGCA CTGTGTACCACCCAAAGCAGCTACAGCCAAAAGGAAGACAGTTAGACTGACTTCGTTAGG CTCACAATCATGTGACCTTGTGTAATAAGCGTGATGAGTTTTATATCATTCATGATCCTG GTGACCATACTTCTTGACCGCTGGGTGCTCTTCACTGAGCATTGTCCTACCCCCGCGCTA GACTTTCTGAAAGCTAGCTGGCCTCTTTTGGAAGCCTCACTGTCCAGCCTCAGCTGGAAA TTTTCTTCATTCTCAAGGGTATGAGCTCATCCCCACACCAGATGGGTTCCTGATAAATGA TGATTGTGCAGTCTCATTATTTTCATGTCATACTCACTCCCTTTGGAAAATAGAAACAGG GCCTGAGGTCTCTTTACCATCTTTCCAAGTGGGAGGAGAATTTCCTCATCGTGGTCACAC ACCCTGCCTTTTGAGAAAAATGCACAGTGTGGAACTAGGTGGCAGTGCTGCCCAAAGGGT C |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 412-531, - strand, RNAz p=0.648393 | |
| 609-721, - strand, RNAz p=0.964169 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 412-531, - strand, RNAz p=0.648393 | |
| 609-721, - strand, RNAz p=0.964169 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 5-186, gnl|bosTau2|chr13 (15951043-15951222) | |
| 5-186, gnl|canFam2|chr2 (25419135-25418816) | |
| 5-186, gnl|dasNov1|scaffold_71572 (2570-2257) | |
| 5-186, gnl|echTel1|scaffold_273293 (6995-7352) | |
| 5-186, gnl|hg17|chr10 (14043642-14043952) | |
| 5-186, gnl|Hg17|chr10 (14043823-14043657) | |
| 5-186, gnl|loxAfr1|scaffold_7 (282520-282854) | |
| 5-186, gnl|mm7|chr2 (4259165-4258907) | |
| 5-186, gnl|panTro1|chr8 (14491533-14491847) | |
| 5-186, gnl|rheMac2|chr9 (14235998-14236325) | |
| 5-186, gnl|rn3|chr17 (85068746-85069011) | |
| 194-721, gnl|bosTau2|chr13 (15951251-15951784) | |
| 194-721, gnl|canFam2|chr2 (25419680-25419296) | |
| 194-721, gnl|dasNov1|scaffold_71572 (2925-2571) | |
| 194-721, gnl|echTel1|scaffold_273293 (6451-6822) | |
| 194-721, gnl|hg17|chr10 (14043095-14043482) | |
| 194-721, gnl|Hg17|chr10 (14043634-14043109) | |
| 194-721, gnl|loxAfr1|scaffold_7 (281974-282345) | |
| 194-721, gnl|mm7|chr2 (4259693-4259297) | |
| 194-721, gnl|Mm7|chr2 (4259172-4259675) | |
| 194-721, gnl|panTro1|chr8 (14490986-14491373) | |
| 194-721, gnl|rheMac2|chr9 (14235451-14235838) | |
| 194-721, gnl|rn3|chr17 (85068251-85068612) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-186, gnl|bosTau2|chr13 (15951043-15951222) | |
| 5-186, gnl|canFam2|chr2 (25419135-25418816) | |
| 5-186, gnl|dasNov1|scaffold_71572 (2570-2257) | |
| 5-186, gnl|echTel1|scaffold_273293 (6995-7352) | |
| 5-186, gnl|hg17|chr10 (14043642-14043952) | |
| 5-186, gnl|Hg17|chr10 (14043823-14043657) | |
| 5-186, gnl|loxAfr1|scaffold_7 (282520-282854) | |
| 5-186, gnl|mm7|chr2 (4259165-4258907) | |
| 5-186, gnl|panTro1|chr8 (14491533-14491847) | |
| 5-186, gnl|rheMac2|chr9 (14235998-14236325) | |
| 5-186, gnl|rn3|chr17 (85068746-85069011) | |
| 194-721, gnl|bosTau2|chr13 (15951251-15951784) | |
| 194-721, gnl|canFam2|chr2 (25419680-25419296) | |
| 194-721, gnl|dasNov1|scaffold_71572 (2925-2571) | |
| 194-721, gnl|echTel1|scaffold_273293 (6451-6822) | |
| 194-721, gnl|hg17|chr10 (14043095-14043482) | |
| 194-721, gnl|Hg17|chr10 (14043634-14043109) | |
| 194-721, gnl|loxAfr1|scaffold_7 (281974-282345) | |
| 194-721, gnl|mm7|chr2 (4259693-4259297) | |
| 194-721, gnl|Mm7|chr2 (4259172-4259675) | |
| 194-721, gnl|panTro1|chr8 (14490986-14491373) | |
| 194-721, gnl|rheMac2|chr9 (14235451-14235838) | |
| 194-721, gnl|rn3|chr17 (85068251-85068612) |