Ova1-OVRM10149C05
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTATGCGGCACGAGGAGAACGAGATCCCCAGCTGCGACCTGAGCAACTTTGCCCGCCCC AGCCCTGTCCTGTCTCCCTCCCCGATGACATCCTTTGCCAGCTCCTGTGCGGAGAAAGGC CCCATCGTTCCTGAGATTCAGGCGCTGCAGGAGGAAATCGCCATCTCCGGCTGCAAGATG CGGCTGAGCTACCTGAGCAGCCGCACCCCGGGCTACAAGGCGGTGCTGAGGATCCGGCTC ACCCACCCGACCATCCCCTTCAACCTCATGAAGGTCCACCTCATGGTGGCGGTCGAGGGC CGCCTCTTCAGGAAGTGGTTTGCCGCAGCCCCAGACCTGTCCTATTACTTCATCTGGGAC AAGACGGACGTCTACAACCAGAAGGTGTTCGGGCTCTCGGAAGCCTTCGTTTCTGTGGGG TATGAGTATGAATCCTGCCCAGATCTGATCCTGTGGGAAAAAAGAACAGCAGTGCTGCAG GGCTATGAAATCGATGCTTCCAAGCTGGGAGGATGGAGCCTGGACAAACATCACGCCCTC AACATCCAAAGTGGCATCCTGCACAAAGGCAACGGGGAGAACCAGTTTGTGTCTCAGCAG CCCCCTGTCATCGGGAGCGTCATGGGCAACGGGCGCCGGAGAAGCATCTCCTGCCCCAGC TGCAACGGCCTGGCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTATGCGGCACGAGGAGAACGAGATCCCCAGCTGCGACCTGAGCAACTTTGCCCGCCCC AGCCCTGTCCTGTCTCCCTCCCCGATGACATCCTTTGCCAGCTCCTGTGCGGAGAAAGGC CCCATCGTTCCTGAGATTCAGGCGCTGCAGGAGGAAATCGCCATCTCCGGCTGCAAGATG CGGCTGAGCTACCTGAGCAGCCGCACCCCGGGCTACAAGGCGGTGCTGAGGATCCGGCTC ACCCACCCGACCATCCCCTTCAACCTCATGAAGGTCCACCTCATGGTGGCGGTCGAGGGC CGCCTCTTCAGGAAGTGGTTTGCCGCAGCCCCAGACCTGTCCTATTACTTCATCTGGGAC AAGACGGACGTCTACAACCAGAAGGTGTTCGGGCTCTCGGAAGCCTTCGTTTCTGTGGGG TATGAGTATGAATCCTGCCCAGATCTGATCCTGTGGGAAAAAAGAACAGCAGTGCTGCAG GGCTATGAAATCGATGCTTCCAAGCTGGGAGGATGGAGCCTGGACAAACATCACGCCCTC AACATCCAAAGTGGCATCCTGCACAAAGGCAACGGGGAGAACCAGTTTGTGTCTCAGCAG CCCCCTGTCATCGGGAGCGTCATGGGCAACGGGCGCCGGAGAAGCATCTCCTGCCCCAGC TGCAACGGCCTGGCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 178-377, - strand, RNAz p=0.76912 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 178-377, - strand, RNAz p=0.76912 |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 139-407, gnl|bosTau2|chr29 (13269107-13268839) | |
| 139-407, gnl|canFam2|chr21 (23172256-23172078) | |
| 139-407, gnl|danRer3|chr15 (22054317-22054494) | |
| 139-407, gnl|dasNov1|scaffold_4552 (17015-16837) | |
| 139-407, gnl|echTel1|scaffold_311248 (84964-85142) | |
| 139-407, gnl|fr1|chrUn (37265461-37265638) | |
| 139-407, gnl|galGal2|chr1 (184219246-184219424) | |
| 139-407, gnl|hg17|chr11 (78118064-78118242) | |
| 139-407, gnl|Hg17|chr11 (78118339-78118071) | |
| 139-407, gnl|loxAfr1|scaffold_49 (139036-138858) | |
| 139-407, gnl|mm7|chr7 (92877395-92877217) | |
| 139-407, gnl|Mm7|chr7 (92877118-92877386) | |
| 139-407, gnl|monDom2|scaffold_46 (11146131-11145953) | |
| 139-407, gnl|oryCun1|scaffold_204000 (103517-103697) | |
| 139-407, gnl|panTro1|chr9 (79455406-79455585) | |
| 139-407, gnl|rheMac2|chr14 (76935642-76935820) | |
| 139-407, gnl|rn3|chr1 (154189431-154189253) | |
| 139-407, gnl|tetNig1|chr16 (5705885-5706063) | |
| 139-407, gnl|xenTro1|scaffold_962 (331345-331168) | |
| 140-404, gnl|bosTau2|chr27 (7035883-7036147) | |
| 140-404, gnl|Hg17|chr4 (184033108-184033372) | |
| 140-404, gnl|Mm7|chr8 (47065611-47065347) | |
| 553-675, gnl|bosTau2|chr27 (7044574-7044696) | |
| 553-675, gnl|canFam2|chr16 (50452833-50452560) | |
| 553-675, gnl|danRer3|chr14 (60433673-60433938) | |
| 553-675, gnl|dasNov1|scaffold_100688 (6014-5741) | |
| 553-675, gnl|echTel1|scaffold_308970 (38226-38499) | |
| 553-675, gnl|fr1|chrUn (37258050-37257782) | |
| 553-675, gnl|galGal2|chr4 (40706565-40706301) | |
| 553-675, gnl|hg17|chr4 (184039457-184039730) | |
| 553-675, gnl|Hg17|chr4 (184039471-184039593) | |
| 553-675, gnl|loxAfr1|scaffold_70852 (4781-5054) | |
| 553-675, gnl|mm7|chr8 (47059888-47059619) | |
| 553-675, gnl|Mm7|chr8 (47059876-47059754) | |
| 553-675, gnl|monDom2|scaffold_9 (64427795-64428074) | |
| 553-675, gnl|oryCun1|scaffold_197797 (186392-186121) | |
| 553-675, gnl|panTro1|chr3 (202255991-202256264) | |
| 553-675, gnl|rheMac2|chr5 (174864460-174864733) | |
| 553-675, gnl|rn3|chr16 (47081776-47082045) | |
| 553-675, gnl|tetNig1|chr20 (1220449-1220183) | |
| 553-675, gnl|xenTro1|scaffold_99 (951800-952077) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 139-407, gnl|bosTau2|chr29 (13269107-13268839) | |
| 139-407, gnl|canFam2|chr21 (23172256-23172078) | |
| 139-407, gnl|danRer3|chr15 (22054317-22054494) | |
| 139-407, gnl|dasNov1|scaffold_4552 (17015-16837) | |
| 139-407, gnl|echTel1|scaffold_311248 (84964-85142) | |
| 139-407, gnl|fr1|chrUn (37265461-37265638) | |
| 139-407, gnl|galGal2|chr1 (184219246-184219424) | |
| 139-407, gnl|hg17|chr11 (78118064-78118242) | |
| 139-407, gnl|Hg17|chr11 (78118339-78118071) | |
| 139-407, gnl|loxAfr1|scaffold_49 (139036-138858) | |
| 139-407, gnl|mm7|chr7 (92877395-92877217) | |
| 139-407, gnl|Mm7|chr7 (92877118-92877386) | |
| 139-407, gnl|monDom2|scaffold_46 (11146131-11145953) | |
| 139-407, gnl|oryCun1|scaffold_204000 (103517-103697) | |
| 139-407, gnl|panTro1|chr9 (79455406-79455585) | |
| 139-407, gnl|rheMac2|chr14 (76935642-76935820) | |
| 139-407, gnl|rn3|chr1 (154189431-154189253) | |
| 139-407, gnl|tetNig1|chr16 (5705885-5706063) | |
| 139-407, gnl|xenTro1|scaffold_962 (331345-331168) | |
| 140-404, gnl|bosTau2|chr27 (7035883-7036147) | |
| 140-404, gnl|Hg17|chr4 (184033108-184033372) | |
| 140-404, gnl|Mm7|chr8 (47065611-47065347) | |
| 553-675, gnl|bosTau2|chr27 (7044574-7044696) | |
| 553-675, gnl|canFam2|chr16 (50452833-50452560) | |
| 553-675, gnl|danRer3|chr14 (60433673-60433938) | |
| 553-675, gnl|dasNov1|scaffold_100688 (6014-5741) | |
| 553-675, gnl|echTel1|scaffold_308970 (38226-38499) | |
| 553-675, gnl|fr1|chrUn (37258050-37257782) | |
| 553-675, gnl|galGal2|chr4 (40706565-40706301) | |
| 553-675, gnl|hg17|chr4 (184039457-184039730) | |
| 553-675, gnl|Hg17|chr4 (184039471-184039593) | |
| 553-675, gnl|loxAfr1|scaffold_70852 (4781-5054) | |
| 553-675, gnl|mm7|chr8 (47059888-47059619) | |
| 553-675, gnl|Mm7|chr8 (47059876-47059754) | |
| 553-675, gnl|monDom2|scaffold_9 (64427795-64428074) | |
| 553-675, gnl|oryCun1|scaffold_197797 (186392-186121) | |
| 553-675, gnl|panTro1|chr3 (202255991-202256264) | |
| 553-675, gnl|rheMac2|chr5 (174864460-174864733) | |
| 553-675, gnl|rn3|chr16 (47081776-47082045) | |
| 553-675, gnl|tetNig1|chr20 (1220449-1220183) | |
| 553-675, gnl|xenTro1|scaffold_99 (951800-952077) |