Non-Coding RNA Search

Ova1-OVRM10154G05

Sequence:


               
               CTGGGACTCACCTCGCAGCCCCCGGCTCCCGGCTCCGGATGGACAGAGCCGCCGCCCAAC
CTTCCAGAGCTCTGGGCGGAGTGGGCGCCGGGACAGGGCGGGTCGGGGCTGGAGGCGGGG
GGCTGCTGCGCCGCGCCCCCAAACGCCGGCTAGGAGCCAACTCCTCCAGGTTGCTAAGAG
GGGCGCTGCGCATCCCGGCCGGCGGGGGTGGAGGAGCGAGGCGGAAACTGTGGGCCCAGA
GGGGAAACGCTTGCCCCCTCGCAGCGGCTCCTGGCTCTAAGCCGGGCCAGAAAAGTGTCC
TGGACCAAAGCTCTGTGCCCATTCTCTCCTCCTCCCTTCCACCCTGTGTAAGTGGCTCCA
GAAGCCGCAGGGTTGGGGGCGTCTTTCGGAGATGTTCTTGCTCTGGGGTCACTCATTCAT
TCGACAAACATCTGCGAGCAAGCCAGGAACTAGGGGTCATCCTTGGAACCTCTGTGGGTC
TTTAGCTGCCCACATTATTACTCCTCCATTAACCGTCGATTCTCTTTCTTAAGTATCTTT
CCAATCCGCCGTTCCCTTCCGTTTCCACTACCATCCCCCCCTTGGCTCCTACAGAAACCT
TCTATCTGCTTCTGGTTTTCTTGTACCCTGGTCCTGCGACGCTCCATCCCCCACAGAAGT
TAGTCAACACTTTAGAGCTGAGAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGGACTCACCTCGCAGCCCCCGGCTCCCGGCTCCGGATGGACAGAGCCGCCGCCCAAC
CTTCCAGAGCTCTGGGCGGAGTGGGCGCCGGGACAGGGCGGGTCGGGGCTGGAGGCGGGG
GGCTGCTGCGCCGCGCCCCCAAACGCCGGCTAGGAGCCAACTCCTCCAGGTTGCTAAGAG
GGGCGCTGCGCATCCCGGCCGGCGGGGGTGGAGGAGCGAGGCGGAAACTGTGGGCCCAGA
GGGGAAACGCTTGCCCCCTCGCAGCGGCTCCTGGCTCTAAGCCGGGCCAGAAAAGTGTCC
TGGACCAAAGCTCTGTGCCCATTCTCTCCTCCTCCCTTCCACCCTGTGTAAGTGGCTCCA
GAAGCCGCAGGGTTGGGGGCGTCTTTCGGAGATGTTCTTGCTCTGGGGTCACTCATTCAT
TCGACAAACATCTGCGAGCAAGCCAGGAACTAGGGGTCATCCTTGGAACCTCTGTGGGTC
TTTAGCTGCCCACATTATTACTCCTCCATTAACCGTCGATTCTCTTTCTTAAGTATCTTT
CCAATCCGCCGTTCCCTTCCGTTTCCACTACCATCCCCCCCTTGGCTCCTACAGAAACCT
TCTATCTGCTTCTGGTTTTCTTGTACCCTGGTCCTGCGACGCTCCATCCCCCACAGAAGT
TAGTCAACACTTTAGAGCTGAGAGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               177-292, + strand, RNAz p=0.696931

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               177-292, + strand, RNAz p=0.696931

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               177-685, gnl|bosTau2|chr13 (55425459-55425978)
               

               
               177-685, gnl|Hg17|chr20 (43467960-43467380)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               177-685, gnl|bosTau2|chr13 (55425459-55425978)
               

               
               177-685, gnl|Hg17|chr20 (43467960-43467380)

	177-685, gnl\|bosTau2\|chr13 (55425459-55425978)
	177-685, gnl\|Hg17\|chr20 (43467960-43467380)