Non-Coding RNA Search

Ova1-OVRM10159C05

Sequence:


               
               GTCACCGCAGAAAGGTGGCGGTTTTCAAGGCACAGTGATTGGCTCTTGTTTTTATTCGCT
AAAAGCCGACTTAAATACAAATGCACCTTTGTATTTTGCCTCATTGGCTTTTCTAGTTGA
CTGCATCATGAACTAATCTTTGCGTATTTAACCCTCTCTACCCTCTGGAGTCTGTCCATC
TGAAATAGAAACTGCAGAGGGTACAGATGACAAGTGTGGGAGCCATTTGATTTTGTCCCA
TAAAATCCTTCCATTCTTTCAGTGTGGAGAGCTTTACCTGTGTAGGTGAAAAGGAGCATC
ACGAAAAATGAGTGAGATGGCACTTACCATGTCTATTTTGGTGAAGCCATTTGCCCAGTT
GTTTAGGGGATTGTGTTAGAAAGTAGAAACCACTCCTTAAAAGACAACTAACTCTTGTTC
TCTCCCATTACAGACTATCTTTGCAAGGTCACGTTCATTCAGAGACTCTTTCAACTTCTG
TGAATGTTGCTTTCCGATAATAGGAACTCAAAATGTTAAGTGAAGGAACACTCCATTCTT
AACTTCACAAACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCACCGCAGAAAGGTGGCGGTTTTCAAGGCACAGTGATTGGCTCTTGTTTTTATTCGCT
AAAAGCCGACTTAAATACAAATGCACCTTTGTATTTTGCCTCATTGGCTTTTCTAGTTGA
CTGCATCATGAACTAATCTTTGCGTATTTAACCCTCTCTACCCTCTGGAGTCTGTCCATC
TGAAATAGAAACTGCAGAGGGTACAGATGACAAGTGTGGGAGCCATTTGATTTTGTCCCA
TAAAATCCTTCCATTCTTTCAGTGTGGAGAGCTTTACCTGTGTAGGTGAAAAGGAGCATC
ACGAAAAATGAGTGAGATGGCACTTACCATGTCTATTTTGGTGAAGCCATTTGCCCAGTT
GTTTAGGGGATTGTGTTAGAAAGTAGAAACCACTCCTTAAAAGACAACTAACTCTTGTTC
TCTCCCATTACAGACTATCTTTGCAAGGTCACGTTCATTCAGAGACTCTTTCAACTTCTG
TGAATGTTGCTTTCCGATAATAGGAACTCAAAATGTTAAGTGAAGGAACACTCCATTCTT
AACTTCACAAACC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               151-267, + strand, RNAz p=0.981001

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               151-267, + strand, RNAz p=0.981001

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-553, gnl|bosTau2|chr16 (1074194-1073658)
               

               
               2-553, gnl|Hg17|chr1 (201909981-201909295)
               

               
               2-553, gnl|Mm7|chr1 (132320630-132321157)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-553, gnl|bosTau2|chr16 (1074194-1073658)
               

               
               2-553, gnl|Hg17|chr1 (201909981-201909295)
               

               
               2-553, gnl|Mm7|chr1 (132320630-132321157)

	2-553, gnl\|bosTau2\|chr16 (1074194-1073658)
	2-553, gnl\|Hg17\|chr1 (201909981-201909295)
	2-553, gnl\|Mm7\|chr1 (132320630-132321157)