Ova1-OVRM10159E06
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTCACTCAATTTTGCTGAGACCTGGAGAAGGAAGTCAGGGGCCCAAGAGGGAGCCATTC CCCTCAGGGGCCTGGGTGCCCTGGGGACAGCATTTTGATATTCCGAAGTAGGAAACTTTG ATTCCCATGGCAAGCCTTGTTCCTGTGCAAAGGAGTCACCTCCAGGGCCCCATCCTCAGG CTGCGCTACATGGTGAAGCAGTTGGAGAACGGAGAGGTGAACATTGAGGAGCTGAAGAAA AACCTGGAGTACACAGCTTCCCTGCTGGAGGCCGTCTATATCGATGAGACGCGACAAATC TTGGACACGGAGGACGAGTTACAGGAGCTGCGGTCCGACGCGGTGCCTTCAGAGGTGCGG GACTGGCTGGCCTCCACCTTCACCCAGCAGACCCGGGCCAAAGGCCGCCGAGCGGAGGAG AAGCCCAAGTTCCGGAGCATCGTCCACGCAGTGCAGGCTGGGATCTTCGTGGAACGGATG TTCCGGAGAACCTACACCTCGGTGGGCCCCACCTATTCCACTGCCGACCTCAACTGTCTC AAGAATCTGGACCTCTGGTGCTTTAATGTCTTTTCCTTGAACCGGGCAGCTGATGACCAC GCCCTGAGGACCATCGTTTTTGAGTTGCTGACTCGGCACAACCTCATCAGCCGCTTTAAG ATTCCCACTGTGTTTTTGATGACTTTCCTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTCACTCAATTTTGCTGAGACCTGGAGAAGGAAGTCAGGGGCCCAAGAGGGAGCCATTC CCCTCAGGGGCCTGGGTGCCCTGGGGACAGCATTTTGATATTCCGAAGTAGGAAACTTTG ATTCCCATGGCAAGCCTTGTTCCTGTGCAAAGGAGTCACCTCCAGGGCCCCATCCTCAGG CTGCGCTACATGGTGAAGCAGTTGGAGAACGGAGAGGTGAACATTGAGGAGCTGAAGAAA AACCTGGAGTACACAGCTTCCCTGCTGGAGGCCGTCTATATCGATGAGACGCGACAAATC TTGGACACGGAGGACGAGTTACAGGAGCTGCGGTCCGACGCGGTGCCTTCAGAGGTGCGG GACTGGCTGGCCTCCACCTTCACCCAGCAGACCCGGGCCAAAGGCCGCCGAGCGGAGGAG AAGCCCAAGTTCCGGAGCATCGTCCACGCAGTGCAGGCTGGGATCTTCGTGGAACGGATG TTCCGGAGAACCTACACCTCGGTGGGCCCCACCTATTCCACTGCCGACCTCAACTGTCTC AAGAATCTGGACCTCTGGTGCTTTAATGTCTTTTCCTTGAACCGGGCAGCTGATGACCAC GCCCTGAGGACCATCGTTTTTGAGTTGCTGACTCGGCACAACCTCATCAGCCGCTTTAAG ATTCCCACTGTGTTTTTGATGACTTTCCTGG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 1-157, + strand, RNAz p=0.633623 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-157, + strand, RNAz p=0.633623 |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 1-193, gnl|bosTau2|chr5 (16245666-16245475) | |
| 1-193, gnl|Hg17|chr12 (53241508-53241701) | |
| 1-193, gnl|Mm7|chr15 (103504064-103504252) | |
| 295-477, gnl|bosTau2|chr5 (16239898-16239716) | |
| 295-477, gnl|canFam2|chr14 (47306406-47306199) | |
| 295-477, gnl|danRer3|chrNA (71571916-71571719) | |
| 295-477, gnl|dasNov1|scaffold_51402 (4439-4630) | |
| 295-477, gnl|echTel1|scaffold_236357 (1103-915) | |
| 295-477, gnl|fr1|chrUn (184361718-184361908) | |
| 295-477, gnl|hg17|chr12 (53249232-53249439) | |
| 295-477, gnl|Hg17|chr12 (53249236-53249418) | |
| 295-477, gnl|loxAfr1|scaffold_46950 (463-274) | |
| 295-477, gnl|mm7|chr15 (103510121-103510328) | |
| 295-477, gnl|Mm7|chr15 (103510125-103510307) | |
| 295-477, gnl|monDom2|scaffold_128 (543802-543992) | |
| 295-477, gnl|oryCun1|scaffold_182492 (935-1142) | |
| 295-477, gnl|panTro1|chr10 (54516343-54516550) | |
| 295-477, gnl|rheMac2|chr11 (51686681-51686888) | |
| 295-477, gnl|rn3|chr7 (142500216-142500423) | |
| 295-477, gnl|tetNig1|chr11 (3469695-3469886) | |
| 295-477, gnl|xenTro1|scaffold_136 (1080982-1080794) | |
| 542-660, gnl|bosTau2|chr5 (16239140-16239022) | |
| 542-660, gnl|canFam2|chr14 (47300815-47300661) | |
| 542-660, gnl|danRer3|chrNA (71567856-71567708) | |
| 542-660, gnl|dasNov1|scaffold_51402 (10462-10589) | |
| 542-660, gnl|echTel1|scaffold_236357 (126-4) | |
| 542-660, gnl|fr1|chrUn (164701417-164701288) | |
| 542-660, gnl|hg17|chr12 (53250272-53250425) | |
| 542-660, gnl|Hg17|chr12 (53250290-53250408) | |
| 542-660, gnl|loxAfr1|scaffold_1128 (161709-161582) | |
| 542-660, gnl|mm7|chr15 (103510843-103510996) | |
| 542-660, gnl|Mm7|chr15 (103510861-103510979) | |
| 542-660, gnl|monDom2|scaffold_128 (548456-548620) | |
| 542-660, gnl|oryCun1|scaffold_118373 (2111-1968) | |
| 542-660, gnl|panTro1|chr10 (54517383-54517536) | |
| 542-660, gnl|rheMac2|chr11 (51687717-51687870) | |
| 542-660, gnl|rn3|chr7 (142500931-142501084) | |
| 542-660, gnl|tetNig1|chr11 (3470429-3470555) | |
| 542-660, gnl|xenTro1|scaffold_136 (1076315-1076169) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-193, gnl|bosTau2|chr5 (16245666-16245475) | |
| 1-193, gnl|Hg17|chr12 (53241508-53241701) | |
| 1-193, gnl|Mm7|chr15 (103504064-103504252) | |
| 295-477, gnl|bosTau2|chr5 (16239898-16239716) | |
| 295-477, gnl|canFam2|chr14 (47306406-47306199) | |
| 295-477, gnl|danRer3|chrNA (71571916-71571719) | |
| 295-477, gnl|dasNov1|scaffold_51402 (4439-4630) | |
| 295-477, gnl|echTel1|scaffold_236357 (1103-915) | |
| 295-477, gnl|fr1|chrUn (184361718-184361908) | |
| 295-477, gnl|hg17|chr12 (53249232-53249439) | |
| 295-477, gnl|Hg17|chr12 (53249236-53249418) | |
| 295-477, gnl|loxAfr1|scaffold_46950 (463-274) | |
| 295-477, gnl|mm7|chr15 (103510121-103510328) | |
| 295-477, gnl|Mm7|chr15 (103510125-103510307) | |
| 295-477, gnl|monDom2|scaffold_128 (543802-543992) | |
| 295-477, gnl|oryCun1|scaffold_182492 (935-1142) | |
| 295-477, gnl|panTro1|chr10 (54516343-54516550) | |
| 295-477, gnl|rheMac2|chr11 (51686681-51686888) | |
| 295-477, gnl|rn3|chr7 (142500216-142500423) | |
| 295-477, gnl|tetNig1|chr11 (3469695-3469886) | |
| 295-477, gnl|xenTro1|scaffold_136 (1080982-1080794) | |
| 542-660, gnl|bosTau2|chr5 (16239140-16239022) | |
| 542-660, gnl|canFam2|chr14 (47300815-47300661) | |
| 542-660, gnl|danRer3|chrNA (71567856-71567708) | |
| 542-660, gnl|dasNov1|scaffold_51402 (10462-10589) | |
| 542-660, gnl|echTel1|scaffold_236357 (126-4) | |
| 542-660, gnl|fr1|chrUn (164701417-164701288) | |
| 542-660, gnl|hg17|chr12 (53250272-53250425) | |
| 542-660, gnl|Hg17|chr12 (53250290-53250408) | |
| 542-660, gnl|loxAfr1|scaffold_1128 (161709-161582) | |
| 542-660, gnl|mm7|chr15 (103510843-103510996) | |
| 542-660, gnl|Mm7|chr15 (103510861-103510979) | |
| 542-660, gnl|monDom2|scaffold_128 (548456-548620) | |
| 542-660, gnl|oryCun1|scaffold_118373 (2111-1968) | |
| 542-660, gnl|panTro1|chr10 (54517383-54517536) | |
| 542-660, gnl|rheMac2|chr11 (51687717-51687870) | |
| 542-660, gnl|rn3|chr7 (142500931-142501084) | |
| 542-660, gnl|tetNig1|chr11 (3470429-3470555) | |
| 542-660, gnl|xenTro1|scaffold_136 (1076315-1076169) |