Non-Coding RNA Search

Ova1-OVRM10160E08

Sequence:


               
               AAGTGTTAAGCAGCGGGCAGGAAGCAGTGGGCAGGGAGTCCAAATGGAGATGTGCTCTTT
CGTGAGAGTGCCATCTCCCAAAGTGTTGGGGTCCTCCAAAGCATTAGGATCTTCCCTCCA
GCCGGGTACAGCTTACCCCTTAGAGATGAGTGCCCTTGGGAAAGTGAGGGTGTCTGAGAG
GAAATCTCCCCTGGGCATGGCGGTGGGATTCGTCCAGGAAGGAAAGGGTGGCTTAGGAGA
GAGAAGAGTCTTCATGGGAACAACATCTCCTACGGAGTTAGGGCTCAGAGTGAGATTAGG
AAAAGAAGATTCCTCATGCACTAATAAATATGAGGAGAGGATAGCATCATCAGAAACAAA
ATCTCCATCAAGCAAAGGGCTTGAAATGAGATTAAAAAGACCAGATATTTCTAGGACCTT
CATGGATGGGAGTAATTTAGGAGTCAACAGGGTCTCAGCCCTACAGGAGACAAAACCTTC
TCTGAGTATGTTGCCAGGAAGGGTGGGTTTAGAAAATGAGCGTTTTTTGGCAGGGTGTTG
TCCTGGGAGGGTAAAACGGCCTCCACTGGGCATGGTGTGTAAAAGTCCACAGGCTGTCAG
G

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGTGTTAAGCAGCGGGCAGGAAGCAGTGGGCAGGGAGTCCAAATGGAGATGTGCTCTTT
CGTGAGAGTGCCATCTCCCAAAGTGTTGGGGTCCTCCAAAGCATTAGGATCTTCCCTCCA
GCCGGGTACAGCTTACCCCTTAGAGATGAGTGCCCTTGGGAAAGTGAGGGTGTCTGAGAG
GAAATCTCCCCTGGGCATGGCGGTGGGATTCGTCCAGGAAGGAAAGGGTGGCTTAGGAGA
GAGAAGAGTCTTCATGGGAACAACATCTCCTACGGAGTTAGGGCTCAGAGTGAGATTAGG
AAAAGAAGATTCCTCATGCACTAATAAATATGAGGAGAGGATAGCATCATCAGAAACAAA
ATCTCCATCAAGCAAAGGGCTTGAAATGAGATTAAAAAGACCAGATATTTCTAGGACCTT
CATGGATGGGAGTAATTTAGGAGTCAACAGGGTCTCAGCCCTACAGGAGACAAAACCTTC
TCTGAGTATGTTGCCAGGAAGGGTGGGTTTAGAAAATGAGCGTTTTTTGGCAGGGTGTTG
TCCTGGGAGGGTAAAACGGCCTCCACTGGGCATGGTGTGTAAAAGTCCACAGGCTGTCAG
G

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               212-319, + strand, RNAz p=0.924522

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               212-319, + strand, RNAz p=0.924522

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_144715, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_144715, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               56-601, gnl|bosTau2|chr29 (44970997-44971541)
               

               
               56-601, gnl|Hg17|chr3 (19950627-19950093)
               

               
               56-601, gnl|Mm7|chr17 (51612993-51612518)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               56-601, gnl|bosTau2|chr29 (44970997-44971541)
               

               
               56-601, gnl|Hg17|chr3 (19950627-19950093)
               

               
               56-601, gnl|Mm7|chr17 (51612993-51612518)

	56-601, gnl\|bosTau2\|chr29 (44970997-44971541)
	56-601, gnl\|Hg17\|chr3 (19950627-19950093)
	56-601, gnl\|Mm7\|chr17 (51612993-51612518)