Non-Coding RNA Search

Ova1-OVRM10165E07

Sequence:


               
               TTCAGTTCCTCAGATGCATTAATCACATTTCTCTGCTCAGTAGCCACAATTTCACCACCA
CAGAAAGTTCTATTGGATTTTTACTACCTTAGACTTTTTTTTTTTTTTTTTTTTTGTCTT
TTTTGTCTTTTTGTTGTTGTTGTTGTTGTTGTTGctatttcttgggccgctcccgcggca
tatggaggttcccaggctaggggtcgaattggagctgtagccaccggcctacgccagagc
cacagcaacgcgggatccgagccgtgtctgcaacctacaccacagctcacggcaacgccg
gatcgttaacccactgagcaagggcagggaccgagcccgcggcctcatggttcctagttg
gattcgttaaccactgcgccacgacgggaactccACCTTAGACTCTTTAGCTGAGTGCCA
GTCAGTTCATGATTAGTGAGGAAACTAACTCAAGGCCAGAAGAAGATCACTAGAAAGCAT
TAGGCAGAACTGGAGTACAGGGCCATGACTATTTTGTTTCCACTAGCCAGTGGAGAAGCA
GCTCTGACACCTGGGACATTGAGTAGAGTCCTTTAAAGGATATTGCCTCAGTATTGGTGC
CAAATTAACCCAGGTATAAAAGGGTTTGCTTAACAAAGTAGAAAAGCGAGCTTCATAAGT
TTTGAATTGTTTTCAAGTCACTGATTCCTCAAAGCTCAAAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCAGTTCCTCAGATGCATTAATCACATTTCTCTGCTCAGTAGCCACAATTTCACCACCA
CAGAAAGTTCTATTGGATTTTTACTACCTTAGACTTTTTTTTTTTTTTTTTTTTTGTCTT
TTTTGTCTTTTTGTTGTTGTTGTTGTTGTTGTTGctatttcttgggccgctcccgcggca
tatggaggttcccaggctaggggtcgaattggagctgtagccaccggcctacgccagagc
cacagcaacgcgggatccgagccgtgtctgcaacctacaccacagctcacggcaacgccg
gatcgttaacccactgagcaagggcagggaccgagcccgcggcctcatggttcctagttg
gattcgttaaccactgcgccacgacgggaactccACCTTAGACTCTTTAGCTGAGTGCCA
GTCAGTTCATGATTAGTGAGGAAACTAACTCAAGGCCAGAAGAAGATCACTAGAAAGCAT
TAGGCAGAACTGGAGTACAGGGCCATGACTATTTTGTTTCCACTAGCCAGTGGAGAAGCA
GCTCTGACACCTGGGACATTGAGTAGAGTCCTTTAAAGGATATTGCCTCAGTATTGGTGC
CAAATTAACCCAGGTATAAAAGGGTTTGCTTAACAAAGTAGAAAAGCGAGCTTCATAAGT
TTTGAATTGTTTTCAAGTCACTGATTCCTCAAAGCTCAAAGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               515-624, - strand, RNAz p=0.965823

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               515-624, - strand, RNAz p=0.965823

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               396-702, gnl|bosTau2|chr5 (34949517-34949821)
               

               
               396-702, gnl|Hg17|chr12 (56047336-56047033)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               396-702, gnl|bosTau2|chr5 (34949517-34949821)
               

               
               396-702, gnl|Hg17|chr12 (56047336-56047033)

	396-702, gnl\|bosTau2\|chr5 (34949517-34949821)
	396-702, gnl\|Hg17\|chr12 (56047336-56047033)