Non-Coding RNA Search

Ova1-OVRM10168F03

Sequence:


               
               CTAAATTCAAGAGTGGTATTTCCCCCACCGTAAAAGTGCTGTCTTTCTATAATTAGTTTT
AAAGGGATTATTTTAGACTCTGAAAGATAGTTCCCCTATCTTTTAGTCTCCATAATAACC
TGTTTAACACCCAGCTTCCAACCCCCCACTAACATAAATACCAAATAGAAAATGAGTGAA
ATCACTGGGTTTGCTTTAGAAGAGCTATTTCAGCTTTGTCTTTGCCCATTAGCTTCAAAC
AATGCAACAGATGCCTGTTAACAGTTTCATGCCCAGTTTTAATTAGCAGATGGAGCTGTG
TTTGTGCCTGTGTTATGCCCAGCACTGGGTTGAGTGACAAGAGTAGCGAGTGGGTTGGAA
CTGGGCCGGGCGTTTGGGTTGAATAAAGCTAAATTCTACTTGTAAAAAGATGAACATAAC
CATTTATTATACAGAACTGCTTGTGTATCTCAGTGGAGCAGCATAGTGTCTACAGTAAAA
CTAATATTTGCAGTTGCGTCTTCTGCTCTCCTTATCCTTTAGAAAATTACATAATACGGA
ACAGGTACCATTTTATGTCTAAATGAAGGTTTTGAGGTAGTCCTGAAGCTAAATAACACA
CAGTGTCTTCCTTTGTAGGTTTGTTTTAGTGTTTTAGTGCCGTATGGTTGAGGACTCTGC
AAAGCCGGGATGCAATGGGCTTCCGTGTGAATGCCAATGCTGCTGGGTTGATAGCTGCCT
CCTGGCATGCTGTGTTACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTAAATTCAAGAGTGGTATTTCCCCCACCGTAAAAGTGCTGTCTTTCTATAATTAGTTTT
AAAGGGATTATTTTAGACTCTGAAAGATAGTTCCCCTATCTTTTAGTCTCCATAATAACC
TGTTTAACACCCAGCTTCCAACCCCCCACTAACATAAATACCAAATAGAAAATGAGTGAA
ATCACTGGGTTTGCTTTAGAAGAGCTATTTCAGCTTTGTCTTTGCCCATTAGCTTCAAAC
AATGCAACAGATGCCTGTTAACAGTTTCATGCCCAGTTTTAATTAGCAGATGGAGCTGTG
TTTGTGCCTGTGTTATGCCCAGCACTGGGTTGAGTGACAAGAGTAGCGAGTGGGTTGGAA
CTGGGCCGGGCGTTTGGGTTGAATAAAGCTAAATTCTACTTGTAAAAAGATGAACATAAC
CATTTATTATACAGAACTGCTTGTGTATCTCAGTGGAGCAGCATAGTGTCTACAGTAAAA
CTAATATTTGCAGTTGCGTCTTCTGCTCTCCTTATCCTTTAGAAAATTACATAATACGGA
ACAGGTACCATTTTATGTCTAAATGAAGGTTTTGAGGTAGTCCTGAAGCTAAATAACACA
CAGTGTCTTCCTTTGTAGGTTTGTTTTAGTGTTTTAGTGCCGTATGGTTGAGGACTCTGC
AAAGCCGGGATGCAATGGGCTTCCGTGTGAATGCCAATGCTGCTGGGTTGATAGCTGCCT
CCTGGCATGCTGTGTTACA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               252-371, + strand, RNAz p=0.866687

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               252-371, + strand, RNAz p=0.866687

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               17-736, gnl|bosTau2|chr10 (31099170-31099878)
               

               
               17-736, gnl|Hg17|chr15 (61276021-61277044)
               

               
               17-736, gnl|Mm7|chr9 (66944186-66943475)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-736, gnl|bosTau2|chr10 (31099170-31099878)
               

               
               17-736, gnl|Hg17|chr15 (61276021-61277044)
               

               
               17-736, gnl|Mm7|chr9 (66944186-66943475)

	17-736, gnl\|bosTau2\|chr10 (31099170-31099878)
	17-736, gnl\|Hg17\|chr15 (61276021-61277044)
	17-736, gnl\|Mm7\|chr9 (66944186-66943475)