Ova1-OVRM10171D11
|
AGTTGCGGCTGCCAGCGAGGCGGACTGGTCGGGTGGAAGCCACAGGCCACGCCGAGGCTG
CAAAGGCCGCGCGAGGGGAGACGCCGCGTCTCTGGCCTGGGGTCGGCAGCCGCCGACTGA
GAAGCTCCGGGTGGACTGAGGATTTGTTGGGTGGAAGGCAGGCATGATCAGGACCGTTTC
ACTGACAGGAAAAGAGAGACGGGACGTGTCTCCCTCCACGTCTTCCCGCCAGTAAAAGCT
GCCAAGCTGGAGCCCAAAGCCAGGTGTCCTGACTCCCAGCGGGGGGCTCCCTGCACCAAC
CATGAGCCGCCTGCTCTGGAGGAAGGTGGCCGGCGCCAGCGTCGGGCCAGGGCCGGTTCC
AGCTCCAGGGCGTTGGGGCTTCAGCTCCGCCCCCGTCCCCGTCCCCA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGTTGCGGCTGCCAGCGAGGCGGACTGGTCGGGTGGAAGCCACAGGCCACGCCGAGGCTG
CAAAGGCCGCGCGAGGGGAGACGCCGCGTCTCTGGCCTGGGGTCGGCAGCCGCCGACTGA
GAAGCTCCGGGTGGACTGAGGATTTGTTGGGTGGAAGGCAGGCATGATCAGGACCGTTTC
ACTGACAGGAAAAGAGAGACGGGACGTGTCTCCCTCCACGTCTTCCCGCCAGTAAAAGCT
GCCAAGCTGGAGCCCAAAGCCAGGTGTCCTGACTCCCAGCGGGGGGCTCCCTGCACCAAC
CATGAGCCGCCTGCTCTGGAGGAAGGTGGCCGGCGCCAGCGTCGGGCCAGGGCCGGTTCC
AGCTCCAGGGCGTTGGGGCTTCAGCTCCGCCCCCGTCCCCGTCCCCA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
172-244, - strand, RNAmicro p=0.999053 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
172-244, - strand, RNAmicro p=0.999053 |
|
139-407, gnl|bosTau2|chr21 (15875117-15875384) |
|
139-407, gnl|canFam2|chr3 (55234283-55234586) |
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139-407, gnl|hg17|chr15 (87677813-87678119) |
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139-407, gnl|Hg17|chr15 (87678150-87677884) |
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139-407, gnl|loxAfr1|scaffold_65446 (490-229) |
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139-407, gnl|mm7|chr7 (75333377-75333632) |
|
139-407, gnl|Mm7|chr7 (75333664-75333397) |
|
139-407, gnl|monDom2|scaffold_45 (11218533-11218285) |
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139-407, gnl|oryCun1|scaffold_170639 (5080-4816) |
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139-407, gnl|panTro1|chr16 (88549263-88549560) |
|
139-407, gnl|rheMac2|chr7 (68962714-68962990) |
|
139-407, gnl|rn3|chr1 (135290396-135290652) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
139-407, gnl|bosTau2|chr21 (15875117-15875384) |
|
139-407, gnl|canFam2|chr3 (55234283-55234586) |
|
139-407, gnl|hg17|chr15 (87677813-87678119) |
|
139-407, gnl|Hg17|chr15 (87678150-87677884) |
|
139-407, gnl|loxAfr1|scaffold_65446 (490-229) |
|
139-407, gnl|mm7|chr7 (75333377-75333632) |
|
139-407, gnl|Mm7|chr7 (75333664-75333397) |
|
139-407, gnl|monDom2|scaffold_45 (11218533-11218285) |
|
139-407, gnl|oryCun1|scaffold_170639 (5080-4816) |
|
139-407, gnl|panTro1|chr16 (88549263-88549560) |
|
139-407, gnl|rheMac2|chr7 (68962714-68962990) |
|
139-407, gnl|rn3|chr1 (135290396-135290652) |
