Non-Coding RNA Search

Ova1-OVRM10171G06

Sequence:


               
               AAACCAAGTAGAGAACATGTTAAGTAAATTGTTTTTTATAGGATTTTTATCTTCAAATTT
GTGACTCCATGGTTTGTTGTGACGTGTCAAACCACATTACTTTCAACTTTTGATCAGATC
GATTAAACTTGGTGAATGTGTTTTGCTCGATATTTGACCCAAAGTTTGTTAGTAATAGCA
TAAACTAGATTTTTAGGGACAACAATAAAGACTGGAAAAAGTACTAAATCAGAAAGCATA
CTGTGGTAGCTTGCCAATGTTAGAACCTGAAAACACCTAAACCAACCAACAGCAAGCAAG
TAAACAAATCAAAAGAAATAAAAGGAAAGAGCTAAATTCAGAGGTACGTAAACAAGCAGT
ATAATGTACCAGAAAGAACACCACGCCAGAATCAGGGGGAATTAGTTCCTACCCTAGCTT
TAGAAATTCCTGTGTGTTTAGGTAATTTGCCCCACGGCCTTAATACCCTTTACTTGCAAA
AACG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAACCAAGTAGAGAACATGTTAAGTAAATTGTTTTTTATAGGATTTTTATCTTCAAATTT
GTGACTCCATGGTTTGTTGTGACGTGTCAAACCACATTACTTTCAACTTTTGATCAGATC
GATTAAACTTGGTGAATGTGTTTTGCTCGATATTTGACCCAAAGTTTGTTAGTAATAGCA
TAAACTAGATTTTTAGGGACAACAATAAAGACTGGAAAAAGTACTAAATCAGAAAGCATA
CTGTGGTAGCTTGCCAATGTTAGAACCTGAAAACACCTAAACCAACCAACAGCAAGCAAG
TAAACAAATCAAAAGAAATAAAAGGAAAGAGCTAAATTCAGAGGTACGTAAACAAGCAGT
ATAATGTACCAGAAAGAACACCACGCCAGAATCAGGGGGAATTAGTTCCTACCCTAGCTT
TAGAAATTCCTGTGTGTTTAGGTAATTTGCCCCACGGCCTTAATACCCTTTACTTGCAAA
AACG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               76-195, + strand, RNAz p=0.855563

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               76-195, + strand, RNAz p=0.855563

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-480, gnl|bosTau2|chr23 (29022689-29022224)
               

               
               1-480, gnl|Hg17|chr6 (22821206-22821681)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-480, gnl|bosTau2|chr23 (29022689-29022224)
               

               
               1-480, gnl|Hg17|chr6 (22821206-22821681)

	1-480, gnl\|bosTau2\|chr23 (29022689-29022224)
	1-480, gnl\|Hg17\|chr6 (22821206-22821681)