Non-Coding RNA Search

Ova1-OVRM10173C04

Sequence:


               
               AAATCGTTGGCCAGCCCCCATCCCGTAGCACACGAATTGCCTGTTTCTGCCATTTGCACA
AAATGTGAAATGCAGCTAATGTCTTACAACTTGCATTTGCACAAATTTAGAAATAAAATT
TCTGGGTTTGGAATAATATTTTCTTTCCAAGAAAATCCTTAATAAGAGGACGGAAAAGAA
CAACTTAACGTTCATTTGGGAGGGAAGAGGANGGTCANATGGAACCACGAGTAGCTCGCC
CAGGTGCTGAGAGGAAGCTGGAGCGTTAAGGAATGGATGGGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATCGTTGGCCAGCCCCCATCCCGTAGCACACGAATTGCCTGTTTCTGCCATTTGCACA
AAATGTGAAATGCAGCTAATGTCTTACAACTTGCATTTGCACAAATTTAGAAATAAAATT
TCTGGGTTTGGAATAATATTTTCTTTCCAAGAAAATCCTTAATAAGAGGACGGAAAAGAA
CAACTTAACGTTCATTTGGGAGGGAAGAGGANGGTCANATGGAACCACGAGTAGCTCGCC
CAGGTGCTGAGAGGAAGCTGGAGCGTTAAGGAATGGATGGGGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               39-158, - strand, RNAz p=0.553228

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               39-158, - strand, RNAz p=0.553228

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-283, gnl|bosTau2|chr8 (56334534-56334251)
               

               
               1-283, gnl|Hg17|chr9 (113807020-113807302)
               

               
               1-283, gnl|Mm7|chr4 (62491741-62492023)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-283, gnl|bosTau2|chr8 (56334534-56334251)
               

               
               1-283, gnl|Hg17|chr9 (113807020-113807302)
               

               
               1-283, gnl|Mm7|chr4 (62491741-62492023)

	1-283, gnl\|bosTau2\|chr8 (56334534-56334251)
	1-283, gnl\|Hg17\|chr9 (113807020-113807302)
	1-283, gnl\|Mm7\|chr4 (62491741-62492023)