Non-Coding RNA Search

Ova1-OVRM10181E06

Sequence:


               
               TTAGGAAACACTTAGCCTGCTGAAGTGCTGAAATGATATCTCCATTGGGAAGAGGCATTT
TTAAGGTCTGGTTTTTGGAATGTGAGGGAATGTGTTCTCATTCACCCAGACCCCTTTGAT
CTAGAATTTGTAACCTTTTAACAAAGACTGGGCTAAAGGTTGCCATTACATCTATGAAAC
TAATGTCTTAAGGAGTTTAATGTAATTAACTACAAATAAATTGTGGCTGTTTAATAATTG
GGAAACTTGCCCATGGTCTCTTGAAAGCCCAACTTCATGGGATTGCTTTGAAAGTAATAA
AACTGCATTACTTTAGATGTATCCTCTCATTCCAAAAAAACTCAGTAATTCAAACAGGCC
TTTTTTCTAAATTAGCCCCAATTCAAAAGGCTTTAACCTACCTGATTAGGCAGCACTGAG
ATTCTTTCAAATCAGTTTTTAATGATAAATTTTGAATACTGGGAGAGATGCTAATGAAAA
TTCCATTTGATACTCAACTCCCAAAGTGACTCTGAAGACCGCATGTGCCTTCAAGAGGAC
TCAGCGCTTATTAGTGATTGACCTAAACAAAGGAGAACCAAGCCTATTAACCCGTGCCCT
TGACTCATGCATGCCTTCACGATGGTCAAGAGCCACTGGCCTCTTTTCCCAAGATCACAG
GATGTTTGGGGCCTGATTCAATGGAAGTCTACTTAAAAGAATAAATTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAGGAAACACTTAGCCTGCTGAAGTGCTGAAATGATATCTCCATTGGGAAGAGGCATTT
TTAAGGTCTGGTTTTTGGAATGTGAGGGAATGTGTTCTCATTCACCCAGACCCCTTTGAT
CTAGAATTTGTAACCTTTTAACAAAGACTGGGCTAAAGGTTGCCATTACATCTATGAAAC
TAATGTCTTAAGGAGTTTAATGTAATTAACTACAAATAAATTGTGGCTGTTTAATAATTG
GGAAACTTGCCCATGGTCTCTTGAAAGCCCAACTTCATGGGATTGCTTTGAAAGTAATAA
AACTGCATTACTTTAGATGTATCCTCTCATTCCAAAAAAACTCAGTAATTCAAACAGGCC
TTTTTTCTAAATTAGCCCCAATTCAAAAGGCTTTAACCTACCTGATTAGGCAGCACTGAG
ATTCTTTCAAATCAGTTTTTAATGATAAATTTTGAATACTGGGAGAGATGCTAATGAAAA
TTCCATTTGATACTCAACTCCCAAAGTGACTCTGAAGACCGCATGTGCCTTCAAGAGGAC
TCAGCGCTTATTAGTGATTGACCTAAACAAAGGAGAACCAAGCCTATTAACCCGTGCCCT
TGACTCATGCATGCCTTCACGATGGTCAAGAGCCACTGGCCTCTTTTCCCAAGATCACAG
GATGTTTGGGGCCTGATTCAATGGAAGTCTACTTAAAAGAATAAATTGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               71-178, - strand, RNAz p=0.818506

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               71-178, - strand, RNAz p=0.818506

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-541, gnl|bosTau2|chr27 (31351027-31350476)
               

               
               1-541, gnl|Hg17|chr3 (24167733-24167170)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-541, gnl|bosTau2|chr27 (31351027-31350476)
               

               
               1-541, gnl|Hg17|chr3 (24167733-24167170)

	1-541, gnl\|bosTau2\|chr27 (31351027-31350476)
	1-541, gnl\|Hg17\|chr3 (24167733-24167170)