Non-Coding RNA Search

Ova1-OVRM10183A09

Sequence:


               
               AAAAACACTTTCACTTTTAACTGGAGGAACCTCATATCCCTGCCTATCCTCTCTTCTTCC
TTCTGTATTTTTAGCTCAGAAACCAAGCAAATAGCCTTAGCATTCCCATCTTCGGCCCTA
GTTGTTAACACTCTCTCTCTCGGCTTTTTCTCATGCCTGAATGGGCCCCCCTTTCCCCAT
CTTCTGAGGAATCCCCCCTCCCCCATGCCCCTTATTTTCCAGGTCTTTCTTGCCAGATCC
CTCTTTTGCCAAGGACTGCTCTGGCGTGGCCTTCCCCTCTCTGGTCTGCGGGGCTCTGCC
TCCTTCTCCTTTTCCCCATCCAGTCTGGACACCCCGCACTCCCACCTCCCGGCTCCCCTG
CACCTAGCCCCCAGCCCCCGCACACCCTCCCCCCTTGCTTTGGCAACTGCGATTTTTTTT
TTTTTTTGCTAGCCTTGTTGTTTACCCAGCAGGTGGATGTGACGTCAGGGACGCACAACA
GCAAAAAATAACAACATCTCCCTCCGCGACGTGTTGGCCTCTCGCGCGCCTTATTTATTT
ATTTGTTCCGGGAGGCCAGGGAGGTTGGGGTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAACACTTTCACTTTTAACTGGAGGAACCTCATATCCCTGCCTATCCTCTCTTCTTCC
TTCTGTATTTTTAGCTCAGAAACCAAGCAAATAGCCTTAGCATTCCCATCTTCGGCCCTA
GTTGTTAACACTCTCTCTCTCGGCTTTTTCTCATGCCTGAATGGGCCCCCCTTTCCCCAT
CTTCTGAGGAATCCCCCCTCCCCCATGCCCCTTATTTTCCAGGTCTTTCTTGCCAGATCC
CTCTTTTGCCAAGGACTGCTCTGGCGTGGCCTTCCCCTCTCTGGTCTGCGGGGCTCTGCC
TCCTTCTCCTTTTCCCCATCCAGTCTGGACACCCCGCACTCCCACCTCCCGGCTCCCCTG
CACCTAGCCCCCAGCCCCCGCACACCCTCCCCCCTTGCTTTGGCAACTGCGATTTTTTTT
TTTTTTTGCTAGCCTTGTTGTTTACCCAGCAGGTGGATGTGACGTCAGGGACGCACAACA
GCAAAAAATAACAACATCTCCCTCCGCGACGTGTTGGCCTCTCGCGCGCCTTATTTATTT
ATTTGTTCCGGGAGGCCAGGGAGGTTGGGGTGGG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               156-270, - strand, RNAz p=0.998757

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               156-270, - strand, RNAz p=0.998757

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-466, gnl|bosTau2|chr22 (24101446-24101910)
               

               
               2-466, gnl|Hg17|chr3 (71716392-71715946)
               

               
               2-466, gnl|Mm7|chr6 (99611477-99611077)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-466, gnl|bosTau2|chr22 (24101446-24101910)
               

               
               2-466, gnl|Hg17|chr3 (71716392-71715946)
               

               
               2-466, gnl|Mm7|chr6 (99611477-99611077)

	2-466, gnl\|bosTau2\|chr22 (24101446-24101910)
	2-466, gnl\|Hg17\|chr3 (71716392-71715946)
	2-466, gnl\|Mm7\|chr6 (99611477-99611077)